Gene Veis_2365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2365 
Symbol 
ID4690443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2675560 
End bp2676645 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content65% 
IMG OID639850131 
Producthypothetical protein 
Protein accessionYP_997129 
Protein GI121609322 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACC AGGCCCGCAA CAACCCTTCC CGCCGGCGCG CGCTCAAGGT CGCGGCAACC 
GGCGTTGGCA CGTGCGCCGC TGCGGCATGG CTGCGATACG CGCGCGCCCA GTCCAGGCGC
ATCGTCATAC GCGACGATGG CGGCGTCTAC AACAGGGCGT ACAACGCCGT GTTCTATAAG
CCGTTCACGG AAAAGACCGG CATCGAATGC CTGGGCGCAC AGGCCAACGC CGAGCCGATC
GCCCAGATCC GCAGCATGGT CGAGACGAAG AACTACACCT GGGACATGGC CAAGATCAGC
CAGCCCGCGA TCTTGCTGCT CACGCAAGGG GGCAAGGTGT ATCTGGACAA GCACCAACTG
GAAAACGACC CCGCAGTGCG CAGCATCCCC GCGCATTTCA TGTCGCCCTA TGGCGTCGGC
GCCAATGTCT ATAGCACCGT GCTGGCGTAC CGGACCGATG CCTTCAAGGG CCGCAAGGCG
CCCAACTCCT GGGCCGACTT CTGGAACCTG AAGGATTTTC CCGGCCGCCG GGCCTTGCGC
AAGCACCCGT TCGACACGCT CGAGGAGGCA TCGATGGCCG CAGGCGTGCC GGCCGCATCG
CTGTATCCGC TGGACATCGA TCGAGCGCTG GCCCATTTGG ACAAGATCAA ACCCGGCATC
GATGTCTGGT GGAATTCCGG CGCGCAGGTC GAGCAGATGC TCAAGTCGGG CGAGGTCGAC
ATGCTCGCCA CCTGGGTCTC GCGTCCGCAA AGCGCGATCG CCGACGGCGC GCCGGTGGCG
ATCGTCTGGA ACCAGAACCT GTGGGGTCTG GACAGTTGGG CCATCCTGGC GGGAACGCCC
CAGGCCCAGG CCTGCCGCGA GTTCATCAAG TTCAGTTCCG ACCCGAAACG CATGGCCGCG
CTGACCGGGT ATTTGCCGGC CGGCGTGACC CAGCCCGAGG CTTTCAGGTA CATCAGGGCC
GATGTCGCCA GGAACTGCCC GAGCCACGCC GACAACATCG GCAATGGGGT GCAGATCAAC
GCCAGATACT GGCTCGACAA CCAGGCGGCG GTGACCGAGC GGTTCAACGC CTGGATCTTG
CAGTGA
 
Protein sequence
MNDQARNNPS RRRALKVAAT GVGTCAAAAW LRYARAQSRR IVIRDDGGVY NRAYNAVFYK 
PFTEKTGIEC LGAQANAEPI AQIRSMVETK NYTWDMAKIS QPAILLLTQG GKVYLDKHQL
ENDPAVRSIP AHFMSPYGVG ANVYSTVLAY RTDAFKGRKA PNSWADFWNL KDFPGRRALR
KHPFDTLEEA SMAAGVPAAS LYPLDIDRAL AHLDKIKPGI DVWWNSGAQV EQMLKSGEVD
MLATWVSRPQ SAIADGAPVA IVWNQNLWGL DSWAILAGTP QAQACREFIK FSSDPKRMAA
LTGYLPAGVT QPEAFRYIRA DVARNCPSHA DNIGNGVQIN ARYWLDNQAA VTERFNAWIL
Q