| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2325 |
|---|
| Symbol | |
|---|
| ID | 4693796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2628615 |
|---|
| End bp | 2629463 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639850092 |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_997090 |
|---|
| Protein GI | 121609283 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.664447 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGC ACACCGCATC CGCATCTTCC GCACAGGCCC TGCCGGTCAT TGCCTTCATT
GGCGGCGGCA ATATGGCCAG CGCCATCATC GGCGGGCTGA TCCGCCAGGG CCATCCTGCC
GGGCAGATCG AGGTGGTCGA GCCTTGGAGC CAAGCGCGCG CGGCCTTGCA CGAGCGCTAC
GGCATCGCGG CGCAGCCCGA GGCCGGCAGC GCCCTGCAAC GCGCCGGGAT CGTGGTCTGG
GCCATCAAGC CCCAGACCTT CAAGGACGCT GCGGCACAGG CCAAGGCCCA TGTCCGGGCG
GCGCTGCAAC TGAGCGTGGC GGCCGGCATT CGATCGGACA GCATCGCCCG GTGGCTGGAC
TGCGAGCGCG TGGTGCGCAC CATGCCCAAC ACGCCCGCGC TGGTGGGCAA GGGCATCAGC
GCGCTGTATG CGCGCGCCGC CGTCGGCGCT GCCGAGCGCC AGAGCGTCGA AGCCATCATG
GCCTGTACCG GCGAATTCCT GTGGGTGGAG CGCGAGCCAC TGCTCGACGC CGTCACCGCC
TTGTCGGGTT CGGGCCCGGC CTATGTGTTT TACTTCCTCG AAGCCATGAC CCGCGCCGGC
AGCGCCATGG GTTTGTCGCA GCCGCAGGCG CACCAGTTGG CCGTGGCTAC TTTTGCCGGC
GCCGCAGAGC TGGCCCGCCG TTCGGACGAG CCCCCTGCGC TGCTGCGCCA GCGCGTTACC
TCCAAAGGCG GCACCACCCA TGCCGCGCTG CAATCGATGG ATGGCGCTGG CATCGGCGCC
AGTTTCGAGG CTGCGATACG CGCCGCCGAG CAGCGCGCGC ATGCGCTGGG CGATGAGTTC
GGGGGCTGA
|
|---|
| Protein sequence | MSQHTASASS AQALPVIAFI GGGNMASAII GGLIRQGHPA GQIEVVEPWS QARAALHERY
GIAAQPEAGS ALQRAGIVVW AIKPQTFKDA AAQAKAHVRA ALQLSVAAGI RSDSIARWLD
CERVVRTMPN TPALVGKGIS ALYARAAVGA AERQSVEAIM ACTGEFLWVE REPLLDAVTA
LSGSGPAYVF YFLEAMTRAG SAMGLSQPQA HQLAVATFAG AAELARRSDE PPALLRQRVT
SKGGTTHAAL QSMDGAGIGA SFEAAIRAAE QRAHALGDEF GG
|
|---|
| |