Gene Veis_2319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2319 
Symbol 
ID4691038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2621827 
End bp2622639 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content63% 
IMG OID639850086 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_997084 
Protein GI121609277 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.170215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.495822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGC CCCGCCTGCA GAAACGCACG CTGTTCCTGA TCGCCTATCT GGTGTTCGCC 
GTGCTGCCCA TCTACTGGAT GGTCAACATG AGCTTCAAGA CCAACGAGGA GATCCTGTCG
AGCTTCTCGC TCTGGCCCCG GCACTTCACC TGGGCCAACT ACGAGACCAT CTTCAGCGAT
GCGTCCTGGT ACTCGGGCTA CATCAACAGC CTGATCTACG TGGCCATCAA CACGGCGATC
TCGCTCACGG TGGCGCTGCC TGCGGCCTAT GCCTTCTCGC GCTACCAGTT CCTGGGCGAC
AAGCATGTGT TCTTCTGGCT GCTGACCAAC CGCATGACGC CGCCGGCCGT GTTCCTGCTG
CCGTTCTTCC AGCTCTACAC CACCGTGGGG CTCATGGACA CGCACATCGC CGTGGCGCTG
GCGCACCTGC TGTTCAACGT GCCGCTGGCG GTGTGGATTC TCGAAGGCTT CATGAGCGGC
ATCCCGCGCG AGATCGACGA GACGGCCTAC ATCGACGGCT ACGGCTTCGC GCGCTTTTTC
GTGACCATCT TTTTGCCGCT CATCAAGGCC GGCGTGGGCG TGGCGGCGTT CTTCTGCTTC
ATGTTCAGTT GGGTGGAACT GCTGCTGGCG CGCACGCTGA CCAGCGTCAA CGCCAAGCCC
ATCGTGGCCA CCATGACGCG CACCGTGAGC GCCTCGGGCA TGGACTGGGC CACGCTGGCT
GCCGCCGGCG TGCTGACCAT CGTGCCCGGC GCCATCGTGA TCTGGTTCGT GCGCCACTAC
ATCGCCAAGG GTTTCGCGAT GGGCCGTGTC TGA
 
Protein sequence
MNEPRLQKRT LFLIAYLVFA VLPIYWMVNM SFKTNEEILS SFSLWPRHFT WANYETIFSD 
ASWYSGYINS LIYVAINTAI SLTVALPAAY AFSRYQFLGD KHVFFWLLTN RMTPPAVFLL
PFFQLYTTVG LMDTHIAVAL AHLLFNVPLA VWILEGFMSG IPREIDETAY IDGYGFARFF
VTIFLPLIKA GVGVAAFFCF MFSWVELLLA RTLTSVNAKP IVATMTRTVS ASGMDWATLA
AAGVLTIVPG AIVIWFVRHY IAKGFAMGRV