| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2301 |
|---|
| Symbol | |
|---|
| ID | 4694390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2610065 |
|---|
| End bp | 2611057 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639850069 |
|---|
| Product | DNA-directed RNA polymerase subunit alpha |
|---|
| Protein accession | YP_997067 |
|---|
| Protein GI | 121609260 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
|---|
| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.960939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCA ATTTGCTGAA ACCCAAGGCA ATCAATGTCG AGCAGCTTGG TCACCACCAT
GCCAAGGTCG CACTGGAGCC GTTCGAGCGT GGCTATGGTC ATACGCTGGG CAACGCCATC
CGGCGCGTGC TGCTCTCGTC GATGGTGGGT TACGCAGCGA CGGAAGTCAC CATCGCAGGC
GTTTTGCACG AGTACTCGTC GATCGACGGG GTGCAAGAGG ACGTGGTCAA CATCCTGCTG
AACCTCAAGG GAGTGGTGTT CAAGCTGCAC AACCGTGATG AAGTGACACT GAGCCTGCGC
AAGGACGGCG AAGGGATGGT CACGGCGCGG GACATACAAA CCCCGCACGA CGTGGAAATC
GTCAACCCGG ACCATGTGAT TGCCAACCTG TCGCAAGGCG GCAAGCTGGA CATGCAGATC
AAGGTCGAAA AAGGCCGTGG CTACATGCCG GGCAACCTGC GCCGCTATGC AGACGAGGTG
ACCAAGTCGA TTGGCCGCAT CGTTCTGGAT GCATCGTTCT CCCCGGTCAG GCGCGTGAGC
TACACGGTGG AAAGCGCCCG CGTCGAACAG CGCACCGACT TGGACAAGCT GGTCGTCGAG
ATCGAAACCA ATGGCGCCAT CACGGCCGAA GACGCAGTGC GGGCATCGGC CAAGATCCTG
GTGGAACAAC TGGCGGTGTT CGCGCAGCTC GAAGGTGGCG AGCTGGCTGC GTTCGACGCA
CCGACCGGGC CACGCGGCAA TGCCAGCTTC GATCCGATCC TGCTGCGCCC GGTCGACGAA
CTGGAGCTGA CCGTGCGCTC GGCCAACTGC CTGAAGGCCG AAAACATCTA CTACATCGGT
GACCTGATAC AGCGCACCGA AAACGAACTG CTCAAGACGC CCAACCTGGG CCGCAAGTCG
CTCAATGAGA TCAAGGAAGT GCTTGCCTCG CGTGGCCTCA CGCTGGGCAT GAAGCTCGAA
AACTGGCCAC CCGCTGGCCT GGACAAACGT TAA
|
|---|
| Protein sequence | MQTNLLKPKA INVEQLGHHH AKVALEPFER GYGHTLGNAI RRVLLSSMVG YAATEVTIAG
VLHEYSSIDG VQEDVVNILL NLKGVVFKLH NRDEVTLSLR KDGEGMVTAR DIQTPHDVEI
VNPDHVIANL SQGGKLDMQI KVEKGRGYMP GNLRRYADEV TKSIGRIVLD ASFSPVRRVS
YTVESARVEQ RTDLDKLVVE IETNGAITAE DAVRASAKIL VEQLAVFAQL EGGELAAFDA
PTGPRGNASF DPILLRPVDE LELTVRSANC LKAENIYYIG DLIQRTENEL LKTPNLGRKS
LNEIKEVLAS RGLTLGMKLE NWPPAGLDKR
|
|---|
| |