| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2255 |
|---|
| Symbol | |
|---|
| ID | 4695104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2552807 |
|---|
| End bp | 2555971 |
|---|
| Gene Length | 3165 bp |
|---|
| Protein Length | 1054 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639850017 |
|---|
| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
|---|
| Protein accession | YP_997021 |
|---|
| Protein GI | 121609214 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGT TCTTCATCGA CCGACCCATC TTTGCCTGGG TGATTGCGCT GTTCATCATG
GTGCTGGGCG GCGTGGCGCT GACGCAGCTA CCGATCTCCC AGTACCCGCC GGTGGCGCCA
CCGACCATCG TCGTCAGCGC CATCTATCCC GGCGCATCGG CACCGACGCT GGAAGACTCG
GTGCTGTCCG TGATCGAGCG CGAAATGAAC GGCGCGCCCG GGCTGATTTA CATGGAGTCT
GTGGCGCAGG CCGATGGCTC GGGCAGCATC ACGCTGAGTT TCGAGACCGG CACCAATCCC
GATCTGGCGC AGGTGGACGT GCAAAACCGG CTCTCGCGCG CCACGCCGCG CTTGCCGGCG
GCGGTGGCGC AGCAGGGCGT GCGCGTGGAC AAAGCGCGCT CGAACTTCCT GCTGTTTACC
ATGCTCGCGT CCACCAACCC GGCCACCGAC CAGGTGGCGC TGGGTGACTA TGCCTCGCGC
AATGTGCTGC CCGAACTGCA ACGCCTGCCC GGCATTGGCC AGGCACAACT GTTCGGCACC
GAGCGCGCGA TGCGCATCTG GATCGACCCC GCCAAGATGG CCGGCTTTTC GCTCTCGGCC
GCCGAGATCA CGGCCGCCAT CCGCGCGCAG AACGCGCAGG TGACCAGCGG CGCGATCGGC
GACCTGCCCC ACATTGCCGG CCAGGCAGAC CAGCAGGTGA CGGCCACCGT CGTCGTCAAC
GGCCAACTCA CCAGCACCGA GCAGTTTGGC AATGTGGTGC TGCGCGCCAA CCCTGACGGC
TCGACCGTGC GCATCAAGGA TGTGGCGCGC GTGGAACTGG GCGGCCAGGC CTACGCCACC
GCCGCCCGCC TGAACGGCCA GCCCGCCGTG GGCGTCGGTC TTCAACTCGC CCCCGGCGGC
AACGCGCTGC AAGCGGCCCG GGCCGTGCGC GCCCGCATGG ATGAACTCGC GCGCCATTTC
CCCCAGGGCA TGGTCTGGAG CATTCCATAC GACAGCTCGC GCTTTGTCAG CCTGTCCATC
CGGCAAGTCG CCGAGACCCT GCTGGAGGCC GTGGCCCTGG TGTTTCTGGT GATGTTTTTG
TTCCTGCAAA ACTGGCGCTA CACGATCATC CCGACCATCG TGGTCCCGGT GGCCCTGCTG
GGCACCTTCG CCACGCTGCT GGCACTGGGT TTTTCGATCA ACGTGCTCAC CATGTTCGGC
ATGGTGCTGG TGATCGGTAT CGTGGTGGAC GACGCCATCG TGGTGGTGGA AAACGTCGAG
CGCATCATGC GCACCGAGGG GCTGTCGCCG CTGGATGCCA CCCGCAAAGC CATGCGCCAG
ATCTCGGGCG CCATCATCGG GGTGACCGTG GTGCTGATCT CGGTGTTCGT GCCGCTGGCG
TTCTTTGCCG GCTCCACCGG CAACATCTAC CGCCAGTTCG CCACCGTGAT GGTCGCGTCC
ATCAGTTTGT CCGCGTTCAT GGCCCTGTCG CTGACCCCGG CGTTGTGCGC CACCTTGCTC
CGCCCCGTGC CGGCCGGGCC GGAGCATGCA AAAGGCGGCT TTTTCGGGGG CTGGAACCGC
GGCTTCGCGC GCACCGCCAA AGGATATGAA AGCCTGGTGG CACGCATGCT CACGCGGGCC
GTCCGTTACC TGGTCCTGTA CGCCGCCATC ATCGGCGCCG TGGCCATTTT GTACCTGCGC
CTGCCCGGCG CGTTCCTGCC GGCAGAAGAC CAGGGCAGCA TCATCGTCAA CGTGCAACTG
CCCCCGGGGG CCACCCAGGA GCGCACGCTG GCCGTGGTGC AGCAGGTCGA GGGCTTCATC
CTGCAGCAGC CCGAAGTGGA AAGCATGGTC GGCGTTCTGG GTTTCAGCTT TTCCGGCCAG
GGGCAAAACG CGGCGCTGGC CTTCGTGACG CTCAAGGACT GGTCTGAACG CCCGAAGCCC
GAGCAATCGG CCCAGGCCCT GGCAGGCCGC GCGTTTGGCG CGCTGATGGG GGTGCGGGAC
GCATTCATCT TCCCGCTGAG CCCGCCACCG ATTCCCGAAC TGGGCAATGC CAGCGGCTTC
ACCTTCCGGC TGCAAGACCG CGGCGCTGCG GGTCACCAGG CATTGGTGCG TGCGCGCAAC
CAATTGCTGG GCCTGGCCGC GCAAAGCAAG CTGCTGGCCC AGGTGCGGCC GGACGGTCTG
GAAGACGCCC CGCAGTTGCA GATCGACATC GACCGCGACC GGGCCAACGC CCTGGGCGTG
TCGTTCGATG CCATCAACTC GGCACTGTCC ACGACCTTGG GCGCGAACTA TGTGAACGAC
TTCCCGAACC AGGGCCGGTT GCAGCGCGTG GTGGTGCAAG CCGATGCCCC GGCCCGCATG
CAGCCGGAGG ATCTGCTGCA GATCAACGCC CACAACCGCC AGGGCCAACC GGTGCCGCTG
TCCGCTTTTG CCAGCACCCG CTGGGTGACC GGCGCGCAGC AGACCGTGCG CTACAACGGC
TACGCGGCAA TGCGCATCTC CGGGTCCGCA GCCCCGGGCT ATAGCACCGG CGCGGCGATG
GCCGAGATGG AAAGACTCGC CGCCCAGTTG CCCGCAGGAT TCGGCTTCGA GTGGACCGGA
CAGTCGCGTG AAGAAAAGCT GGCCGGCGCG CAAGCGCTGA TCCTGTACAG CTTTTCGATC
CTGGCGGTGT TCCTGTGCCT GGCCGCGCTG TACGAGAGTT GGTCGATTCC GCTGGCCGTG
ATCCTGGTGG TGCCGCTGGG CGTGCTGGGC GTGCTGCTGG CCACCTTGCT GCGCGGCTAC
GCGAACGACA TCTACTTCCA GGTGGGGCTG ATCACCATCA TCGGCCTGTC GGCCAAGAAC
GCCATTTTGA TCATCGAATT TGCCAAGGAC CTGCAGGCCC AGGGTCAGGG CTTGATCGAA
TCGGCGCGGG CCGCTGCCCG GTTGCGCTTT CGCCCCATCG TGATGACCTC GATGGCCTTT
GGCTTGGGCG TCATGCCGCT GGTCATCGCC TCGGGTGCCG GCTCGGCCAG CCAGCGCGCC
ATCGGCACCG GCGTGCTGGG CGGCATGATC ACCGGCACGG CGCTGGCCCT GTTCTTCGTA
CCCTGGTTCT TCGTCATGGT CCGCGGCCTG TTCAAAGGCA GCGCGCGCCA GCAGCAAATG
AACCGCCGCC ACGCGCAAGC CGCAGGAGTC GAAACCCATG ATTGA
|
|---|
| Protein sequence | MAKFFIDRPI FAWVIALFIM VLGGVALTQL PISQYPPVAP PTIVVSAIYP GASAPTLEDS
VLSVIEREMN GAPGLIYMES VAQADGSGSI TLSFETGTNP DLAQVDVQNR LSRATPRLPA
AVAQQGVRVD KARSNFLLFT MLASTNPATD QVALGDYASR NVLPELQRLP GIGQAQLFGT
ERAMRIWIDP AKMAGFSLSA AEITAAIRAQ NAQVTSGAIG DLPHIAGQAD QQVTATVVVN
GQLTSTEQFG NVVLRANPDG STVRIKDVAR VELGGQAYAT AARLNGQPAV GVGLQLAPGG
NALQAARAVR ARMDELARHF PQGMVWSIPY DSSRFVSLSI RQVAETLLEA VALVFLVMFL
FLQNWRYTII PTIVVPVALL GTFATLLALG FSINVLTMFG MVLVIGIVVD DAIVVVENVE
RIMRTEGLSP LDATRKAMRQ ISGAIIGVTV VLISVFVPLA FFAGSTGNIY RQFATVMVAS
ISLSAFMALS LTPALCATLL RPVPAGPEHA KGGFFGGWNR GFARTAKGYE SLVARMLTRA
VRYLVLYAAI IGAVAILYLR LPGAFLPAED QGSIIVNVQL PPGATQERTL AVVQQVEGFI
LQQPEVESMV GVLGFSFSGQ GQNAALAFVT LKDWSERPKP EQSAQALAGR AFGALMGVRD
AFIFPLSPPP IPELGNASGF TFRLQDRGAA GHQALVRARN QLLGLAAQSK LLAQVRPDGL
EDAPQLQIDI DRDRANALGV SFDAINSALS TTLGANYVND FPNQGRLQRV VVQADAPARM
QPEDLLQINA HNRQGQPVPL SAFASTRWVT GAQQTVRYNG YAAMRISGSA APGYSTGAAM
AEMERLAAQL PAGFGFEWTG QSREEKLAGA QALILYSFSI LAVFLCLAAL YESWSIPLAV
ILVVPLGVLG VLLATLLRGY ANDIYFQVGL ITIIGLSAKN AILIIEFAKD LQAQGQGLIE
SARAAARLRF RPIVMTSMAF GLGVMPLVIA SGAGSASQRA IGTGVLGGMI TGTALALFFV
PWFFVMVRGL FKGSARQQQM NRRHAQAAGV ETHD
|
|---|
| |