| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2253 |
|---|
| Symbol | |
|---|
| ID | 4692553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2550182 |
|---|
| End bp | 2551147 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639850015 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_997019 |
|---|
| Protein GI | 121609212 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG ACCCAGTCCT GACCCAACGC ATGGGTTTCT TTCTGGTGCC GCATTTTTCG
ATGATGGCCC TCAGTTCCGC CACCGAACCG CTGCGCGCAG CCAACCGGGT GGCAGGCAAG
CCGCTCTACA GTTGGCACCT GGTCAGTGCC GACGGCGAGC CGGTACCCTC GAGCTCCGGC
TTTGCCCTGC TGCCCGAATT TGCCATGACC CTGGCGCCGG AATTTAGCCA TTTCTTTGTC
GTGGCAAGCA TTGGCGTGGC GGATTATCGC AACCAGCAAG TGTTTCAGTT CTTGAGGCGC
TATGCCGCCA GCGGGCGGCC ACTCGGCGGC ATCAGCCTTG GCTCCATGAT CCTGGCGCGG
GCCGGGCTGC TCGACCAGCG GCGTTGCACG ATACACTGGG AAGCCTTGAG AGCGCTGGCC
GACGAGTTCC CGGCAATCGA GGTCTGCCGC GACCTTTACT GCGTCGACGG CAACCGCCTG
ACCTGCGCCG GCGGCACGGC GGCCATGGAC CTGATGCTGG AACTCATCGC CCGCCAGCAT
AGCCGCCAAC TCGCCGTCGA AGTGGCCGAC CAGTTCCTGC ACACGCGCAT ACGCAGCGCC
GCAGAAAGCC AGAAGATGGC CATCGAATGG CGCTACGGCG TTGCAGACCG GCGCATCGTC
AACGCCATCA CGCTGATGGA ACAAAACATC GAGCGGCCCA TTCCGATGAA AACCATCGCC
TCTCTGGTCG GCATCTCGCC GCGCCAGTTT GAGCGGATGT GGTGGAAGCA CTTCAATATG
CGCCCATCGC AGTTCTACAT CGAGCTGCGC TTGAAGGCGG CGCAAAAACT GCTGCACGAA
TCGACCTGGT CGCTGCTCGA CATCGCCATG CGCTGCGGCT TTACCGGAGC ATCCCATTTT
GGCCGCTGCT ACCGGAAATT ATTTGATCGC ACACCGGGCG AAGAACGCAA CGCTACGCCC
CGTTGA
|
|---|
| Protein sequence | MKPDPVLTQR MGFFLVPHFS MMALSSATEP LRAANRVAGK PLYSWHLVSA DGEPVPSSSG
FALLPEFAMT LAPEFSHFFV VASIGVADYR NQQVFQFLRR YAASGRPLGG ISLGSMILAR
AGLLDQRRCT IHWEALRALA DEFPAIEVCR DLYCVDGNRL TCAGGTAAMD LMLELIARQH
SRQLAVEVAD QFLHTRIRSA AESQKMAIEW RYGVADRRIV NAITLMEQNI ERPIPMKTIA
SLVGISPRQF ERMWWKHFNM RPSQFYIELR LKAAQKLLHE STWSLLDIAM RCGFTGASHF
GRCYRKLFDR TPGEERNATP R
|
|---|
| |