| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2250 |
|---|
| Symbol | |
|---|
| ID | 4694835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2546499 |
|---|
| End bp | 2548115 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639850012 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_997016 |
|---|
| Protein GI | 121609209 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCA TCGCCTCCCT CTTTGAAAAC ACCGTCAGCA AATACCCCGA CCGCCCGGCC
CTCGCCTGCG GCGCCAGCAC ACTTTCCTAT GCCGCCTGGA ATGCGCGTGT CCGACGCTTT
GCGCAAGCCC TGTTCAACCT GGGGGTGCGC CAGATGGACC GGGTTGCCAT CCTGCAAAAG
ACCTCCGAGG CAACACCGAC CGCGTACATG GCCTGCCAGT TGCTCGGCGC GATTGCCGTG
CCGATGAATC ATCGGCTCTC GCCCGATGAG GCGGCCTACA TCCTGCGCGA TGCCGGCGCC
CGCGCCGTGA TCTACGACGA TGCGATGCTG CCGCTCATGG GCAAGATGGT GCTGGCGCTG
CCGGACCTGC GCACCTTCAT CCGCGTGCGC AGCGCAGCGT CCGATGTGTC CGATGTGTCC
GGTGCGTCCG GTGCGTCCGG TGCGTCCGGT GCGCCCGATG CGCCCGGCCT GCCAAAACAC
CATCATTGCT TCGAGGCGCT GATCGATGGC GCCACACGGC TCGATGCGCC GCTGCCGCAA
CCGGGCGCGG AGGATATCTC GGCCATCGTC TACACCTCCG GCACGACCGG GCGTCCGAAA
GGCGCGATTC ACACCCACGG CAATGATGTG GCGATTGCGA CCAACTGCGT GATGGAGTAC
AGCCTGACCT GCACCGACGT GGCGCTGCAT ATCGCGCCGC TGTATCACGT CGGCGGCATG
CAAGCCTATT TCCTGCCGCA CATGGTGGTG GGCGCTGCCA ACGTGATCTT GCCGCGTTAC
ACAGCGCTGA CCACGCTGGA GGCGATTGCG CGCCATCGCG TCACCACCTT GTTCGCAGTG
CCCACGCAAA TTCAGGACAT GCTGTTCCAC CCCGACTTCG CCGCCATGGA TGTCAGCAGC
CTGCGCATGA TCACCACAGG CGGCGCCGCC ATTGCTGCGG CCACGATGCA GCGCGTCATC
CATGAGTTTT GCCCCCGCGT CTTCAACGGC TATGGCATGA CCGAAGCCAG TCTGACCCTG
CTGCTGCATC CGCGCGATGC CTTGGCGCAT CTCGGCTCCT GCGGCAAGCC GACCCTGATC
AGCACCTGCC GCGTCATCAG GAACGACCCT GAACGCAGGG TCGCCGCCAG CGAGACCCTG
GCTGCCGGCG AGGTCGGACA ACTCATCGTG CGAGGCCCGC AACTGGTTGC CCGCTACTGG
AACGACCCCG CTGAAACGGA AAAAAAATTC AGGGATGGCT GGCTCTACAC AGGCGACCTT
TTCAGCGTCG ATGACGCCGG ATATTTTCAC TTTCATGGAC GCGCCGACGA CATGATCGTG
TCCGGCGGCG AAAACATCTA TCCGCGCGAA ATCGAGGAAG TCCTGTACCA CTGCCCCGGC
GTGCAAGAGG CCGCCGTGAT TGGCCTGCCC GACCCGAAAT GGGGGCAGGC CGTCACGGCC
TTCGTGGTCA AGAGCGATAT CGATCTCCTT GCCGCCGAGG TCATCGCCTT CTGCAAGGCC
AGCCTCACGT CGTACAAATG CCCGAAACAA GTGTTCTTCC TCGACCAGTT GCCGCGCAAC
CCCAGTGGCA AGATATTGCG CAGGGAACTG GCACCGCAAC CGGGAGTCTC GGCATGA
|
|---|
| Protein sequence | MPTIASLFEN TVSKYPDRPA LACGASTLSY AAWNARVRRF AQALFNLGVR QMDRVAILQK
TSEATPTAYM ACQLLGAIAV PMNHRLSPDE AAYILRDAGA RAVIYDDAML PLMGKMVLAL
PDLRTFIRVR SAASDVSDVS GASGASGASG APDAPGLPKH HHCFEALIDG ATRLDAPLPQ
PGAEDISAIV YTSGTTGRPK GAIHTHGNDV AIATNCVMEY SLTCTDVALH IAPLYHVGGM
QAYFLPHMVV GAANVILPRY TALTTLEAIA RHRVTTLFAV PTQIQDMLFH PDFAAMDVSS
LRMITTGGAA IAAATMQRVI HEFCPRVFNG YGMTEASLTL LLHPRDALAH LGSCGKPTLI
STCRVIRNDP ERRVAASETL AAGEVGQLIV RGPQLVARYW NDPAETEKKF RDGWLYTGDL
FSVDDAGYFH FHGRADDMIV SGGENIYPRE IEEVLYHCPG VQEAAVIGLP DPKWGQAVTA
FVVKSDIDLL AAEVIAFCKA SLTSYKCPKQ VFFLDQLPRN PSGKILRREL APQPGVSA
|
|---|
| |