Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2247 |
Symbol | |
ID | 4694739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2543501 |
End bp | 2544400 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639850009 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_997013 |
Protein GI | 121609206 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.242692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATC CATTGCTTGC ACGCGCCTTC GCCTTGACCT GCGTGCTGCT GACGGCGTTC TGGAGCACCC CCTCGTCAGC AGCGCCGATC GTGGTCGGCG GCAAGAATTT CACCGAGCAG CAATTGATGA CGGAGATAAC CACGCAATTG CTGGAGGCCA AGGGCTTTGA GATTGTCAAG AAGGATGGCA TGGGCAGCGC AGTGCTGCGG CAGGCGCAGG AGAACGGCCA GATCGATCTG TACTGGGAAT ACACCGGCAC CTCGCTCATC ACCTACAACA AAGTGAGCGA ACGCTTCAGC CCGGAGGACA CCTACCGGAA GGTCAAGGAA CTCGATGCGG CCAAGGGCCT GGTGTGGCTG AACCCGTCGC GCGCCAATAA CACCTACTCG CTCGCCATGA ATGCAGACGA GGCGAACAAG CAGGGGATTG TCAGCATCAG CGATCTGGCA CAGGCCATCC GCAGCGGCAA GGCGCTCCGT TTCGCCTGCA ATTCCGAGTT CTATGCCCGC CCGGATGGCT TGCGTCCGCT GGAAAAGAGC TATGGCTTCG ACTTCGCGCG CGCCAAGCTC AAGCGCATGG ACACCGGCCT GACCTATCAG GCCCTGAAAG ACCGCCAGGT GGATATTGCG CTGGTCTTTG CCACCGATGG CCGTGTGCCT GCCTTCAACT TTGTGATATT GAAGGACGAC AAGGGCTTTT TCCCGGCCTA TGCATTGACG CCGGTGGTCA GAAAGGTCGT GCTCGACGCC AATCCCTCGC TGGCCCCCAT TCTGAATGCA CTGTCCGAAA AACTCGATGC CCCCACCATG GCGCGCCTGA ACGCGAGTGT CGATGTCTCC CGCAAATCAT TGCGCGAGGT CGCCCGCGAC TTCCTGAAAC AGTCGGGCCT GATCGGATGA
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Protein sequence | MKNPLLARAF ALTCVLLTAF WSTPSSAAPI VVGGKNFTEQ QLMTEITTQL LEAKGFEIVK KDGMGSAVLR QAQENGQIDL YWEYTGTSLI TYNKVSERFS PEDTYRKVKE LDAAKGLVWL NPSRANNTYS LAMNADEANK QGIVSISDLA QAIRSGKALR FACNSEFYAR PDGLRPLEKS YGFDFARAKL KRMDTGLTYQ ALKDRQVDIA LVFATDGRVP AFNFVILKDD KGFFPAYALT PVVRKVVLDA NPSLAPILNA LSEKLDAPTM ARLNASVDVS RKSLREVARD FLKQSGLIG
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