Gene Veis_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2244 
Symbol 
ID4690609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2540960 
End bp2541649 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content62% 
IMG OID639850006 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_997010 
Protein GI121609203 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.259993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGACAT TTGATTTCAT ATGGTCCGAT CTGGCGAGCA TTGCCGCCAT GACCGTTCAG 
CACATCGAGA TTGTCGGTGT CGGCATCGGC CTGGCCATCT TGACCGGCGT GCCGCTCGGC
ATTCTGATCA CCGGCAACGC GGGCCTGGCG AAAGTCGTGC TGTACACGGC GGCCATGATC
ATGACGATTC CATCCGTGGC GCTGTTTGGC CTCATGATTC CGGTGCTCTC CGTCATCGGC
CAGGGCATCG GCTTTTTGCC CACCGTGATC GCGCTGTTTC TCTACGCGCA GTTGCCCATC
GTGCGCAACA CCTACACCGC GATTACCAAT ATCGACCCGG CGCTGCGCGA AGCCGCCAAG
GCCATGGGCA TGAAGACCGG CGAGCGGCTG CGCAAGGTGG AGCTGCCGAT TGCCTTGCCC
ATCATCATGG CCGGGGTGCG CATGGCGGTG GTGATCAATG TGGGCGTTGC CGCGATTGCG
GCCTACATCG GCGCCGGCGG CCTTGGCAAG CTCATCAGCC GCGGCATCTC CCAATCCGAC
CCGCGCCAGT TGATCGCCGG CGCCATCCTG ATCAGCGTGC TGGCCATCGC AGCCGATTTT
GCTCTGGGCT GCTTGCAGCG GCTGCTGACG CCCAAAGGGT TGCGCTCCGC ACCATGGCTG
GCAGGTTTTC GCAAATATCG GCCATCATGA
 
Protein sequence
METFDFIWSD LASIAAMTVQ HIEIVGVGIG LAILTGVPLG ILITGNAGLA KVVLYTAAMI 
MTIPSVALFG LMIPVLSVIG QGIGFLPTVI ALFLYAQLPI VRNTYTAITN IDPALREAAK
AMGMKTGERL RKVELPIALP IIMAGVRMAV VINVGVAAIA AYIGAGGLGK LISRGISQSD
PRQLIAGAIL ISVLAIAADF ALGCLQRLLT PKGLRSAPWL AGFRKYRPS