Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2244 |
Symbol | |
ID | 4690609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2540960 |
End bp | 2541649 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639850006 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_997010 |
Protein GI | 121609203 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.259993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAGACAT TTGATTTCAT ATGGTCCGAT CTGGCGAGCA TTGCCGCCAT GACCGTTCAG CACATCGAGA TTGTCGGTGT CGGCATCGGC CTGGCCATCT TGACCGGCGT GCCGCTCGGC ATTCTGATCA CCGGCAACGC GGGCCTGGCG AAAGTCGTGC TGTACACGGC GGCCATGATC ATGACGATTC CATCCGTGGC GCTGTTTGGC CTCATGATTC CGGTGCTCTC CGTCATCGGC CAGGGCATCG GCTTTTTGCC CACCGTGATC GCGCTGTTTC TCTACGCGCA GTTGCCCATC GTGCGCAACA CCTACACCGC GATTACCAAT ATCGACCCGG CGCTGCGCGA AGCCGCCAAG GCCATGGGCA TGAAGACCGG CGAGCGGCTG CGCAAGGTGG AGCTGCCGAT TGCCTTGCCC ATCATCATGG CCGGGGTGCG CATGGCGGTG GTGATCAATG TGGGCGTTGC CGCGATTGCG GCCTACATCG GCGCCGGCGG CCTTGGCAAG CTCATCAGCC GCGGCATCTC CCAATCCGAC CCGCGCCAGT TGATCGCCGG CGCCATCCTG ATCAGCGTGC TGGCCATCGC AGCCGATTTT GCTCTGGGCT GCTTGCAGCG GCTGCTGACG CCCAAAGGGT TGCGCTCCGC ACCATGGCTG GCAGGTTTTC GCAAATATCG GCCATCATGA
|
Protein sequence | METFDFIWSD LASIAAMTVQ HIEIVGVGIG LAILTGVPLG ILITGNAGLA KVVLYTAAMI MTIPSVALFG LMIPVLSVIG QGIGFLPTVI ALFLYAQLPI VRNTYTAITN IDPALREAAK AMGMKTGERL RKVELPIALP IIMAGVRMAV VINVGVAAIA AYIGAGGLGK LISRGISQSD PRQLIAGAIL ISVLAIAADF ALGCLQRLLT PKGLRSAPWL AGFRKYRPS
|
| |