| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2237 |
|---|
| Symbol | |
|---|
| ID | 4692528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2532889 |
|---|
| End bp | 2534541 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639849999 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_997003 |
|---|
| Protein GI | 121609196 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATA TTTCCTCGGG CAGGCTGATG GCAACCGCCA TGGCTTGCAT GACGTTGACC
ACGGCGCTGG CGCAGACGGA CAGCCGCCCC GTGCTCAGGA TCGCCGTTCA GCAAGTCACC
AATACCGGGT CCCTGATCCC TTTGCGGGAA CGAAGCAATG TGGGGTCCCG CAGCTTTCCG
ATGATCTACG CCGGCCTGAT CGAAATCGAC CGGCAAGGGA ATCTGTCGCT CAAACCCGGT
CTGGCCACGT CATGGAAACG CATCGATGAG CGCACCGTGG AGCTCAAACT GCGCAAGGGC
GTGAAGTTTC ACAATGGCGA CGAGATGACC GCCGAAGACG TGGCCTTCAC GTTCGGCCCC
GAGTATATGT TTGCCGCGAC CGAGCCGCGG CGCGCCGGGC AGAAAGCGGT CACCATCAAG
ACCGATGCTT CTGCCGCAGG TGCGCAGACG GCAGGCAAAG CGCTGGCGCT GCCCCCTGAA
GTGCCGGCCA TCGCCAGACG GCTGTGGCCA TCGCTGGAGC AGGTCAAGGT CATCGACAAG
CACACCGTGC GCTTCGTCAA TGCCGTGCCC GATGTCACGA TGGAGGGGCG CATTGCCCGC
TCCGGCTCGG AAATCATTTC CAGGCGCGCG TTCCTTGCGG CGAAAGACTG GGCCTCCTGG
TCGCGCAGCC CGGTTGCGGC AGGGCCGTTC AAGGTCAAGG AACTCAGGCC GGACAATTTG
CTGGTTCTGG TCGCACATGA TGCCTACTAC GGCGGCAAAC CCCCGGTGCG CGAAGTGCGC
TATCAGGTGG TTCCCGAGGT ATCGGGACGG GTCAATGGCC TGCTCAGCGG CGAATACGAC
TTCGTGGCCG ATGTGCCCCC GGACCAGATC AAGACCATCG AGGCGAATCC GAAGTTCGAA
GTGGTCGGCG GCCCCGCGCT GAACCACCGC CTGATCGCGT TTGACAAGCA CCATCCGCAA
CTGGCCGATC CGAGAATCCG CCTGGCGCTG GCCCACGCCA TCGACCGCGA CGCCATCGTC
AGCACGCTGT GGGCCGCCCG GACCAGCGTT CCCGCAGGTC TGCAATGGGA ATACTACGGC
CCCATGTTCC ACAAGGACTG GAGCGTGCCG CGCTACGACC CCCAACTGGC AGCCCGGCTG
GTCCGCGAAG CGGGCTACAA AGGCGAGCCC ATTCCTTACC GCGTTCTGAA CAACTACTAC
ACCAACCAAG TGCAAACCGC CCAGATTCTG GTGGAGATGT GGCGCGCAGT CGGTCTGAAC
ATCCAACTGC AAATGAAGGA AAACTGGCAG CAGATTTTCG ATCAGGGTGC GCCGCGCGGG
ATCCGTGACT GGTCCAACTC CTCGCCGTTC AATGACCCCG TCAGTTCCAT CGTCGACCAG
CATGGCGCCA ACGGTCAGCA GCAACAGATG GGTGAATGGT CGAACAGCGA GTTCAACACG
CTGGCGACCT TGCTGGAAAA CGCCACGGAC ATGTCCAACC GCAGCCGGGT TTTCCGGCGC
ATGCTGGAGA TTGCCGAGCG GCAAGACCCG GCCTATACCG TCTTGCACCG CAGTGCGCAG
TTCTACGGCA AGCGCAAGGA CATTGACTGG AAATGGTCCC CGACATTCGC GATGGACTTC
AGCGCCGACA ACCTGCGCAT GCCCGGAAAA TGA
|
|---|
| Protein sequence | MPDISSGRLM ATAMACMTLT TALAQTDSRP VLRIAVQQVT NTGSLIPLRE RSNVGSRSFP
MIYAGLIEID RQGNLSLKPG LATSWKRIDE RTVELKLRKG VKFHNGDEMT AEDVAFTFGP
EYMFAATEPR RAGQKAVTIK TDASAAGAQT AGKALALPPE VPAIARRLWP SLEQVKVIDK
HTVRFVNAVP DVTMEGRIAR SGSEIISRRA FLAAKDWASW SRSPVAAGPF KVKELRPDNL
LVLVAHDAYY GGKPPVREVR YQVVPEVSGR VNGLLSGEYD FVADVPPDQI KTIEANPKFE
VVGGPALNHR LIAFDKHHPQ LADPRIRLAL AHAIDRDAIV STLWAARTSV PAGLQWEYYG
PMFHKDWSVP RYDPQLAARL VREAGYKGEP IPYRVLNNYY TNQVQTAQIL VEMWRAVGLN
IQLQMKENWQ QIFDQGAPRG IRDWSNSSPF NDPVSSIVDQ HGANGQQQQM GEWSNSEFNT
LATLLENATD MSNRSRVFRR MLEIAERQDP AYTVLHRSAQ FYGKRKDIDW KWSPTFAMDF
SADNLRMPGK
|
|---|
| |