| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2211 |
|---|
| Symbol | |
|---|
| ID | 4691110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2505289 |
|---|
| End bp | 2506167 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639849973 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_996977 |
|---|
| Protein GI | 121609170 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.278659 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.743935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTACC GTTCCGTCTT TCGACCCCGG CTCTTCGAGG GCCAAGTGAT CGTCATCACC
GGCGGGGGCA GCGGCATCGG CCGCTGCACC GCGCACGAGT TGGCCAGCCT CGGCGCCCGG
TTGGCGCTGG CGGGCCGCAC CGGCGCCAAG CTCCAGGCGG TGCAGGCGGA GATCGCCGCT
GCGGCACCCG GGGCCGCCGA GCATGTCAGC ACCCATGTCT GCGACATCCG CGACGAAGAC
GCCGTGCGCG ACACGGTGGG CGCCGTGCTG GCGCGGCATG GCCGCATCGA CGGCCTGTTC
AACAACGCCG GCGGGCAGTT TCCCGCCCCT TTGCGCGCCA TCAGCCGCAA GGGCTGGGAA
GCGGTGCTGC GCAACAACCT GACCGGCGGC TTTCTGATGG CCCGCGAATG CTTCACGCAA
TGGATGGAAA TGCACGGCGG CGCCATCGTC AACATCATTG CCGACATGTG GGGCGGCATG
CCCGGGATGG GCCACTCGGG CGCGGCGCGC GCGGGCATGT TGTCGTTCAC CGAAACCGCC
GCCTGCGAAT GGGCCGCAGC GGGCGTGCGT GTCAACGCGG TGGCGCCGGG CTGGATCGCT
TCGAGCGGGC TGGAGACCTA TGACGCGGCT TTCCGGGAAC GCATCAAGGC GCTGCGCCGC
AAGGTGCCGA TGCAGCGCCT GGGCACCGAG GCCGAGGTGG CGGCGGCCGT GTGCTTTTTG
CTGTCGGAGG CGGCCGCCTT CATCACCGGC TCGACCCTGC GTGTGGACGG CGGCGTGCCG
AACGCGCGCC ACACCTGGGC GCTGCCCGAG CACCGCAACT CGCGGCCGTA CAACGGCTTT
GCGCTCTACC AGAGCCCGGC TTTTCTGGAC CAGCCCTGA
|
|---|
| Protein sequence | MHYRSVFRPR LFEGQVIVIT GGGSGIGRCT AHELASLGAR LALAGRTGAK LQAVQAEIAA
AAPGAAEHVS THVCDIRDED AVRDTVGAVL ARHGRIDGLF NNAGGQFPAP LRAISRKGWE
AVLRNNLTGG FLMARECFTQ WMEMHGGAIV NIIADMWGGM PGMGHSGAAR AGMLSFTETA
ACEWAAAGVR VNAVAPGWIA SSGLETYDAA FRERIKALRR KVPMQRLGTE AEVAAAVCFL
LSEAAAFITG STLRVDGGVP NARHTWALPE HRNSRPYNGF ALYQSPAFLD QP
|
|---|
| |