Gene Veis_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2171 
Symbol 
ID4690986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2464034 
End bp2465971 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content68% 
IMG OID639849933 
ProductABC transporter related 
Protein accessionYP_996937 
Protein GI121609130 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.380674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA TCACCTTGCT CGACGCCCAA CTCGCCTATG GCCATGTGGC ATTGCTGGAC 
CATGCCGACT TCGTGCTGGA AAGCGCCGAG CGCGTCGGCC TGATTGGCCG CAATGGCGCG
GGCAAGTCTT CGCTGCTGAA GATTCTGGCC GGCCTGGCCC CGGCCGATGA CGGCGCATTG
CATTCGTCCC CGGGGCTGCG CATTGCCCTG GTGGCGCAGG AGCCGGTGCT CGACCCCTGC
GCCAGCGTTT TCCGGGCCGC GTCCGAGGGC TTGCAGCGGG TGATTGCGAT CCGTGACCAG
TACCTGGGCG GCGCCGCTGG TCTGGACCTC GATGCCTTGC AGTCCGAGAT CGAAGCCCAT
GACGCCTGGA ACTGGGAGCA GCGCGTGCAA GAAACGCTGC AGCGGCTGCA TCTGCCGCCG
GATGCGCTGG TGGGCAGTTT GTCGGGCGGC ACCCGCAAGC GCGTGGCCTT GGCGCAAGCC
CTGGTCGCTC GCCCGGATGT GTTGCTGCTG GACGAGCCGA CCAACCACCT GGACCTGGAG
GCGATCGAAT GGCTCGAAGA CCTGCTGCTG GCCTTTTCCG GCAGCGTGGT CACCATCACC
CACGACCGCT CGTTCCTGGA CCGCGTTGCC ACGCGCATCG TCGAACTCGA CCGGGGGCAA
CTGCGCTCTT ACCCGGGCAA CTTTGCGCAG TACCTGCGCC ACAAGGACGA GCAACTGGCG
CAGGAGGCCG GCAGCGCGGC CAAGGCCGAC AAGCTCTTGG CGCAAGAGGA GGTCTGGATA
CGGCGCGGCG TGCAGGCGCG CCGCACCCGC AGCGAAAGCC GCATCAGCCG CCTGGAGCGG
TTGCGGGCGC AGCGGCAGGC GCGCCGTGAA GTCATCGGCA GCGTGCGCAT GGAGGTGGCG
ACAGCGGGGG CCGCCGGCGC CGGCTATCAG GGCAAGATCG TGGCCGAGCT GACCGGGGTC
GGCAAGTCCT TTGGCGCCAA GACCATCGTG CGCGACTTCA GCAGCACGAT ACTGCGCGGC
GACAAGGTGG GCTTGACAGG CCCCAATGGC GCCGGCAAGA CCAGCCTGCT GAAAATGATC
CTGGGCGAAC TGCCGCCCGA CCAGGGGCGG GTGCGCCAAG GCGCAAACCT GCAGGTGGCG
TACTTTGACC AACTGCGCGA GACCATCGCG CTCGACGCGA CGCTGGAGGA CTTCATCAGC
CCGGGCAGCG AATGGATAGA GATCGGCCAG CAGCGCAAGC ATGTCAGAAG CTATCTGGGC
GACTTCCTGT TTTCCCCTGC CCGGGCGCGT TCGCCGGTCC GCTCGCTGTC CGGCGGCGAG
CGCAGCCGGC TGCTGCTGGC GCGCTTGTTC GCGCGCCCGG CGAATGTGCT GGTGCTCGAC
GAGCCGACCA ACGATCTGGA CATGGACACG CTGGAGCTGC TCGAAGAACT GCTGGAGAAC
TACGCCGGCA CGGTGTTTCT GGTCAGCCAC GACCGGACCT TTCTGGACAA CGTGGTCGGC
AGCATCATCG CGTTCGAGGG CGACGGACTC TGGCGCGAAT ACGCCGGCGG CGTGCAGGAC
TGGCTGCTGC AAGCCGGGCG CAGCCGGGCG GCCGGTGCTG CGGCCGTCGC CGCCAGGCCC
GCAGCCATGG CAACCACCGC AACCGCAGCA ACCACGGCAA CCACGGCAAC CACGCAGGCG
CCGCAGCGCG CGAAGATGCC GGTCCAGCCC GCCAAGCTGA GCTACAAGGA GCAGCGCGCG
CTGGAGCAAC TGCCGGCGCA GATCACGGCG CTGGAGACCG AGCAGCAGGG ATTGCAGCGG
GCCTTGGCCG ATGGACTGCT TTTCCGCACC GACCCTGCCG CTGCCGTCGC GCTGACGAGC
CGGGTCGCGG CCATCGATGA GGAACTGATG GCGGCGCTGG AGCGTTGGAC GGCGTTGTCC
GACGGGCAGC GCCGCTGA
 
Protein sequence
MALITLLDAQ LAYGHVALLD HADFVLESAE RVGLIGRNGA GKSSLLKILA GLAPADDGAL 
HSSPGLRIAL VAQEPVLDPC ASVFRAASEG LQRVIAIRDQ YLGGAAGLDL DALQSEIEAH
DAWNWEQRVQ ETLQRLHLPP DALVGSLSGG TRKRVALAQA LVARPDVLLL DEPTNHLDLE
AIEWLEDLLL AFSGSVVTIT HDRSFLDRVA TRIVELDRGQ LRSYPGNFAQ YLRHKDEQLA
QEAGSAAKAD KLLAQEEVWI RRGVQARRTR SESRISRLER LRAQRQARRE VIGSVRMEVA
TAGAAGAGYQ GKIVAELTGV GKSFGAKTIV RDFSSTILRG DKVGLTGPNG AGKTSLLKMI
LGELPPDQGR VRQGANLQVA YFDQLRETIA LDATLEDFIS PGSEWIEIGQ QRKHVRSYLG
DFLFSPARAR SPVRSLSGGE RSRLLLARLF ARPANVLVLD EPTNDLDMDT LELLEELLEN
YAGTVFLVSH DRTFLDNVVG SIIAFEGDGL WREYAGGVQD WLLQAGRSRA AGAAAVAARP
AAMATTATAA TTATTATTQA PQRAKMPVQP AKLSYKEQRA LEQLPAQITA LETEQQGLQR
ALADGLLFRT DPAAAVALTS RVAAIDEELM AALERWTALS DGQRR