| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2119 |
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| Symbol | |
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| ID | 4694867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2408586 |
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| End bp | 2409611 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639849881 |
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| Product | rhamnose ABC transporter, periplasmic rhamnose-binding protein |
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| Protein accession | YP_996885 |
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| Protein GI | 121609078 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02637] rhamnose ABC transporter, rhamnose-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.37979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGATGA AGAAGAAACC ACTGAAAACC CTGCGGGCGA CCGCGCTGGC GGCCTTGCAG
GCCGTGGCAT GGGGCGCCGC GCTGGCCAGC CCGGCGCTGG CCGCAGACAA GATTGCCGTG
GTTGTCAAAA GCCTGGGCAA CGGGTTTTTC GACGCCGTGA ACCAGGGCGC GCAGGAGGCG
GCCAAAGAGA TCAAGAACAT CGAGATCATC TATACCGGCC CGGCCAAATC CACGGCCGAG
GGCCAGATCG AGATCATCAA CGCGCTGATT TCGCAAAAGG TCGCCGCCAT CGTCATCTCG
GCCAATGACC CCGATGCGCT GGCGCCGTCG CTCAAGCGCG CCATGGGGCG CGGCATCAAG
GTGCTGTCGT TCGACTCCGG CGTGCGCAAG GACGGCCGCA TGATGCATCT GAGCCCGTCG
AGCAACGCGC TGATCGGTGA AAAACTGGTG CAACTGACGC AGCAGGCGAT AGGCGACAGC
GGCGAGATTG CCGTCGTCTC GTCCACGGCC CAGGCCACGA ACCAGAACAT CTGGATCGAA
GAAATCCGGA AGGTGCTGGC CCGGCCGGCC TACAAGGGGC TGAAACTGGT CAGCGTGGCC
TACGGCGATG ACCAGATCGA CAAGAGCTAC CGCGAAACCC AGGGCCTGTT CAAGAGCTAC
CCGAACCTGA AGGCCATCAT TGCGCCCACC ACCATTGGCG TGGCGGCGGC GGCCAAGGCC
GTGCAGGACG AGAAGAAGGT CGGCTCGGTG TATGTGACCG GCCTGGGTCT GCCGTCCGAG
ATGGCCGGCC ATGTCAAGAA CGGCGCGGTC AAGTCCTTTG CCATCTGGAA CCCGATCGAC
CTGGGCTATT CCTCGATCCA GGCTGCCAGC CAGCTCATCG CGGGCAAGTT CACCGGCAAG
CCGGGCGACA AGGTGTCGCT GGGCCGGGTC GGCAGCGTGG TGCTGGACGC CAACAGTGAG
GCGGCGATGG CCGAGCCGTT CACTTACGAC GCCAGCAACG TCGAGAAATT CGCCAAGATA
TTCTGA
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| Protein sequence | MMMKKKPLKT LRATALAALQ AVAWGAALAS PALAADKIAV VVKSLGNGFF DAVNQGAQEA
AKEIKNIEII YTGPAKSTAE GQIEIINALI SQKVAAIVIS ANDPDALAPS LKRAMGRGIK
VLSFDSGVRK DGRMMHLSPS SNALIGEKLV QLTQQAIGDS GEIAVVSSTA QATNQNIWIE
EIRKVLARPA YKGLKLVSVA YGDDQIDKSY RETQGLFKSY PNLKAIIAPT TIGVAAAAKA
VQDEKKVGSV YVTGLGLPSE MAGHVKNGAV KSFAIWNPID LGYSSIQAAS QLIAGKFTGK
PGDKVSLGRV GSVVLDANSE AAMAEPFTYD ASNVEKFAKI F
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