| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2116 |
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| Symbol | |
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| ID | 4693465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2406125 |
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| End bp | 2407411 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639849879 |
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| Product | L-rhamnose catabolism isomerase |
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| Protein accession | YP_996883 |
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| Protein GI | 121609076 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4952] Predicted sugar isomerase |
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| TIGRFAM ID | [TIGR02629] L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.885684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTGC TGGACCCCGG TCTGATCCAA GACCACAACC ACCGCCTGCT GCGCCATGTG
GCCAGCGACT ACGAGCACCT GGGCGAGCAA CTGGCGCGGC GCCATATCGA CATCGATGCG
GTGCGCCAGA AAGTCGCGGC CTTTGGCGTG GCCATCCCCA GTTGGGGCGT GGGCACCGGC
GGCACCCGGT TTGCGCGCTT TCCCGGCCCG GGCGAGCCGC GCAATGTGTT CGACAAGCTG
CAAGACTGCG GCGTGATCTG GCAGTTGGCC CGCGCCACCC CCGGCGTGTC GCTGCATATC
CCGTGGGACC AGTGCAGCGA TTGGCCCGCG CTGCGCGCCG TCGCCGATGG CTACGGCCTG
GGCTTCGACG CGATCAACTC GAATACCTTT TCCGACCAGC CCGGCCAGGC GCACAGCTAC
AAGTTCGGCA GCCTGAGCCA CACGGATGCC GGCACCCGGG CCCAGGCCGT GGCGCACAAC
ATCGAATGCG TGGCCATTGG CCAGCGCATC GGCAGCAAGG CGCTGACGGT GTGGGTGGGC
GACGGCAGCA ACTTTCCGGG CCAGCAGCAT TTGCGCCGCG CCTTCGAGCG CTATCTGGAC
AGCGCGCGCC AGATTTATGC GGCCCTGCCG GACGATTGGC GCATGTTTGT CGAGCACAAG
ATCTGCGAGC CGGCGTTCTA CGGCACCGTG ATCCAGGACT GGGGCTCCAG CTACCTGGCG
GCCAGCGCGC TGGGCCCGAA GGCGCAATGC CTGGTGGACT TGGGGCACCA CGCCCCGAAC
GTGAATATCG AGATGATCGT CGCGCGCCTG ATCGCCGCAG GCAAATTGGC GGGTTTTCAT
TTCAATGACA GCAAGTACGG CGATGATGAC CTGGACGCTG GCAGCATCGC GCCCTACCGG
TTGTTTTTGG TGTTCAACGA ACTGGTGGCG GCAGCGCATG AGAAACTGGC CTTCGAGCCG
GCCTACATGC TCGACCAGAG CCACAACGTC ACCGACCCGA TCGAGAGCCT GATGACCAGT
GCCGCCCAGG TGCAGCGCAG CTACGCCCAG GCGCTGATCG TCGAGCGCAG CCTGCTCGAT
GCCGCGCAGC AGGCCAACGA TGCGCTGCTG GCCAGCCAGA CGCTCAAGCG CGGCTTCGAG
ACCGATGTCA CCCCGATCCT GCAACGGGTG CGCCTGGACG CGGGCGGCGC CATCGACCCG
GTGGCTGTCT ACCGCGCCAG CGGCTACCGC CAGCGGGTGG CCAAAGACCG CCCGGCCAGC
GCGGGCAGCG GCGGCGGCAT CGTTTGA
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| Protein sequence | MTVLDPGLIQ DHNHRLLRHV ASDYEHLGEQ LARRHIDIDA VRQKVAAFGV AIPSWGVGTG
GTRFARFPGP GEPRNVFDKL QDCGVIWQLA RATPGVSLHI PWDQCSDWPA LRAVADGYGL
GFDAINSNTF SDQPGQAHSY KFGSLSHTDA GTRAQAVAHN IECVAIGQRI GSKALTVWVG
DGSNFPGQQH LRRAFERYLD SARQIYAALP DDWRMFVEHK ICEPAFYGTV IQDWGSSYLA
ASALGPKAQC LVDLGHHAPN VNIEMIVARL IAAGKLAGFH FNDSKYGDDD LDAGSIAPYR
LFLVFNELVA AAHEKLAFEP AYMLDQSHNV TDPIESLMTS AAQVQRSYAQ ALIVERSLLD
AAQQANDALL ASQTLKRGFE TDVTPILQRV RLDAGGAIDP VAVYRASGYR QRVAKDRPAS
AGSGGGIV
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