| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2115 |
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| Symbol | |
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| ID | 4693452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2403964 |
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| End bp | 2406072 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639849878 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_996882 |
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| Protein GI | 121609075 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC CGATTCCTGC ACGAGACTTT CCGCGTTGGG ATGCCAACCA TGCTGCCACG
CTCGATGCTG CGCGGCTGCT GCTGTACCGC TCGAACCTGC TGGGCTCGGA TCTGCGCATC
ACCAATTACG GCGGCGGCAA CACCTCGGCC AAGATCTGGC AGGCCGACCC GCTCACCGGC
CAGCAGGTGC AGGTGCTGTG GGTCAAGGGC TCGGGCGGCG ACCTGGGTTC GATGGCGCTG
GACGGTTTCT CCACGCTGTA CATGGACAAG TTGCTCGCCC TGCAAGCCAT TTACCGTGGC
CCCGGGCATG AGGACGAGAT GGTGGGCTAT CTGCCGCATT GCACCTTCAA CCTGAACCCG
CGCGTCGCCA GCATCGATAC GCCGCTGCAT GCCTACCTGC CTTTTGCGCA TGTAGACCAT
ATGCACCCGG ACGCGGTCAT CGCCATTGCC GCGATGGCCG ATAGCGAAAA GCTGACGCAG
CAGATTTTTG CCGGCACTGT CGGCTGGCTG CCTTGGCGCA GGCCCGGTTT CGAGCTGGGC
CTGATGCTGC AGCGCTACCA GGCGGCCCAC CCTGGCCAGC GCGGCCTGGT GCTGGCCGGC
CATGGCTTGT TCAGTTGGGG GGACGATGCC CGTGCCTGTT ATGACAATAC GGTGGGCCTG
ATCGCCTCGG CCCAGAACTG GCTCGACCGC GAACGGGTGG TGCGCCAGGT GCCCAGTTTC
GGCGGCCCGG CGCGCCAGGC GCTGAGCCAG GACGAGCAGG ACGCCACGCT GGCGCGGGTG
CTGCCGGTGC TGCGCGGCCT GGCCAGCAAG ACCGGCCCCA AGCTGCTGCA TGTCGAGCGC
CAGGCGGCGG TGCTGGAGTT CGTCAACAGC CGCGACCTGG CGCCGCTGGC GGCCTTGGGC
ACCTCCTGCC CGGACCATTT CCTGCGCACC AAGATTCGCC CGCTGATCCT GGAGCCGGCG
GTCTACATGC TGCAAGGCGC TGCGCTGGCG CAGGCGCTGC AAGAACGGCT GGCGGCCTAC
CGCGCCGACT ACGGCGCCTA CTACCAGCGC TGCCGGCGCG CAGACAGTCC GGCGCTGCGC
GATGCCAACC CGGTCATCGT CCTGCTGCCC GGCATCGGCA TGGTGGCCAT GGCCAAAGAC
AAGGCCACGG CGCGCATTGC CGCCGAGTTT TATGTCAACG CCATCAACGT GATGCGCGAG
GCCCATGCCA TCGACCGCTA TGTGGGCCTG CCCGAGCAGG AGGCTTTCGA CATCGAATAC
TGGTGGCTCG AAGAAGCCAA GTTGCAGCGC AGCCCCCCGC CGAAACCGCT GGCCGGCAAA
GTGGCGCTGG TCACCGGCGG CGCCGGCGGC ATCGGGCGGG CGATTGCCCG GCGCGTGTTG
GCCGAAGGCG CCTGCGTGGT GCTGGTCGAT ATCGACCAGG GCGCGCTGGC GACGGTGACC
GCCGAACTGG CCCAGGCCCA TGGCCCGGAC CATGTGCGCG GCTTGCAGTG CGATGTCACC
AGCGAGGCCA GCGTCATCGC CGCCTTCCGC CATGCGGCGC TGGAGTTTGG CGGCCTGGAC
ATTGCGGTGA GCAACGCCGG CATTGCTGCC GCAGCGCCGC TGGAGGACAC CAGCATCGAG
CTGTGGAACC ACAGCCAGGG CGTATTGGCC ACCGGTTATT TTCTGGTCGG CCGTGAAGCC
TTCCGGCTGA TGAAGGCGCA GGGCGCAGGC GGCAGCATCG TCGTCATCGC CAGCAAGAAC
GGCATGGTCG CCAGCCCGCA GGCCAGTGCT TATTGCGCCG CCAAGGCCGC AGAAATCCAG
CTCAGCCGCA GCTTTGCGCT CGAAGGCGCG CCATGGGGCA TACGCTCGAA CGTGGTGAAC
CCGGATGCGG TGATCCGTGG CTCCAGGATC TGGAGCGGCA AGTGGAGCGC CGAGCGCGCT
GCGGCCAACA AGATTGCCGA GCAAGACCTG GAAGCCTTCT ACCGCGACCG CTCCATGCTC
AAGCGCAGCG TCTTGCCCGA GGACATTGCC GAGGCGGCTT ATTTTTTTGC CGCAGAACGG
CTCAGCGCCA AAAGCACCGG CAACATCCTG AATGTGGATG CCGGCAACCT GGCGGCTTTC
ACCCGATGA
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| Protein sequence | MTTPIPARDF PRWDANHAAT LDAARLLLYR SNLLGSDLRI TNYGGGNTSA KIWQADPLTG
QQVQVLWVKG SGGDLGSMAL DGFSTLYMDK LLALQAIYRG PGHEDEMVGY LPHCTFNLNP
RVASIDTPLH AYLPFAHVDH MHPDAVIAIA AMADSEKLTQ QIFAGTVGWL PWRRPGFELG
LMLQRYQAAH PGQRGLVLAG HGLFSWGDDA RACYDNTVGL IASAQNWLDR ERVVRQVPSF
GGPARQALSQ DEQDATLARV LPVLRGLASK TGPKLLHVER QAAVLEFVNS RDLAPLAALG
TSCPDHFLRT KIRPLILEPA VYMLQGAALA QALQERLAAY RADYGAYYQR CRRADSPALR
DANPVIVLLP GIGMVAMAKD KATARIAAEF YVNAINVMRE AHAIDRYVGL PEQEAFDIEY
WWLEEAKLQR SPPPKPLAGK VALVTGGAGG IGRAIARRVL AEGACVVLVD IDQGALATVT
AELAQAHGPD HVRGLQCDVT SEASVIAAFR HAALEFGGLD IAVSNAGIAA AAPLEDTSIE
LWNHSQGVLA TGYFLVGREA FRLMKAQGAG GSIVVIASKN GMVASPQASA YCAAKAAEIQ
LSRSFALEGA PWGIRSNVVN PDAVIRGSRI WSGKWSAERA AANKIAEQDL EAFYRDRSML
KRSVLPEDIA EAAYFFAAER LSAKSTGNIL NVDAGNLAAF TR
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