| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2090 |
|---|
| Symbol | |
|---|
| ID | 4691772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2375489 |
|---|
| End bp | 2376505 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639849854 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_996858 |
|---|
| Protein GI | 121609051 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.58265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.319975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGG CAAGACAAGC GCCAGAGGCT GTTTACCGAT GTTCCCGTTC TCTGAAAGCC
CTTGCCATGT CCACCTTGCC TGCCGTGCTG CAAAACCTGT CGCTACCCCT CATCGGCGCG
CCGCTGTTCA TCATCAGCAA CCCACGGCTC GTGATCGAGC AATGCCAGGC CGGCATCGTC
GGCGCCATGC CCGCGCTCAA TGCCCGCCCG GTCGAGCAAC TCGATGAGTG GCTGGCCGAG
ATCACCGAAA CCCTGGCCGC CTACGACCGT GCCCACCCCG ACCGGCCAGC CGCACCCTTT
GCCATCAACC AGATCGTGCA CAAGAGCAAT GACCGGCTGG AGCACGACAT GCAGGTCTGC
GCCAAATACC GGGTGCCGAT CGTCATCACC AGCCTGGGAG CGCGCGAAGA CGTGAACCAG
GCCGTGCACG GCTGGGGCGG CATCGTGCTG CACGACATCA TCAACAACCG GTTTGCGCAC
AAGGCGATCG AAAAAGGCGC CGACGGCCTG ATCGCCGTGG CCGCCGGCGC CGGCGGCCAT
GCGGGCACCA AGAGCCCGTT TGCGCTGATC CAGGAAATCC GCCAGTGGTT CGACGGCCCG
CTCGCACTCT CGGGCGCAAT CGCCTCGGGC GGGGCGGTGC TGGCCGCGCA GGCCATGGGG
GCCGATCTGG CCTACATCGG CTCGGCCTTC ATCGCCACCC ACGAAGCGCG CGCCAGCGAT
GACTACAAGC AGGCCATCGT GGCTTGCAGC TCCGACGACA TCATCTACAG CAACCTGTTC
ACCGGCGTGC ATGGCAACTA CCTGGCGCCA TCGATCCGTG CTGCGGGCCT GGACCCGGAG
CACCTGCCCG AGGCCGACCC GAGCAAGATG AATTTCAGCG GCGGCGCCAG AAAAGCCTGG
AAGGACATCT GGGGCTGCGG ACAAGGCATT GGCGGCATCG ATGCCGTCAC CAGCGCCGCC
GACCTGGTGG CCCGACTGCG CCGCGAATAT GCCGCCGCCC GCGCCCGCTT GATGTGA
|
|---|
| Protein sequence | MAQARQAPEA VYRCSRSLKA LAMSTLPAVL QNLSLPLIGA PLFIISNPRL VIEQCQAGIV
GAMPALNARP VEQLDEWLAE ITETLAAYDR AHPDRPAAPF AINQIVHKSN DRLEHDMQVC
AKYRVPIVIT SLGAREDVNQ AVHGWGGIVL HDIINNRFAH KAIEKGADGL IAVAAGAGGH
AGTKSPFALI QEIRQWFDGP LALSGAIASG GAVLAAQAMG ADLAYIGSAF IATHEARASD
DYKQAIVACS SDDIIYSNLF TGVHGNYLAP SIRAAGLDPE HLPEADPSKM NFSGGARKAW
KDIWGCGQGI GGIDAVTSAA DLVARLRREY AAARARLM
|
|---|
| |