Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2066 |
Symbol | |
ID | 4691729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2347658 |
End bp | 2348140 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639849830 |
Product | thioesterase superfamily protein |
Protein accession | YP_996834 |
Protein GI | 121609027 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.576639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00365834 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCTCGC CCGCCAGCAC CTCTTGCGCC TGCGTCCCCG CAGCGGCCCG TCCGGCCCCC CAGGCGCGCA GCGCCTACCG CGTGTTTCGC TGCATCGCCA CCCGCTGGGC GGACAACGAC ATGTACGGCC ATGTGAACAA TGTCGTGTAC TACGGCTGGT TCGATACGGC GGTGAATGCG CACTTGATCG AGCAGGGTGT GCTCGACATC CATGCCGGCC AGACCATTGG TCTGGTCGTC GAAACCCGGT GCAATTATTT TGCCCCGCTG GCCTTTCCGC AGACCGTGGA GGCGGGCATC CGCGTGGCGC GCCTGGGCGG CTCCAGCGTC TGCTACGAGT TGGGCCTGTT CGCGCAGGGC GCGCCGCTCA CGGCGGCGGC AGGCCATTTC ATCCATGTGT ATGTCGATCG CGCAAGCCGC CGGCCGGTGC CGCTGCCGCC GGCTTTGCGC GCTGTGCTGC AGGCCCTGGT GATGCCGGGC TGA
|
Protein sequence | MTSPASTSCA CVPAAARPAP QARSAYRVFR CIATRWADND MYGHVNNVVY YGWFDTAVNA HLIEQGVLDI HAGQTIGLVV ETRCNYFAPL AFPQTVEAGI RVARLGGSSV CYELGLFAQG APLTAAAGHF IHVYVDRASR RPVPLPPALR AVLQALVMPG
|
| |