| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2065 |
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| Symbol | |
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| ID | 4692648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 2345794 |
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| End bp | 2347611 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639849829 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_996833 |
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| Protein GI | 121609026 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.414534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00479598 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGCCC GGCGGGCCGA GGGCCATTCT CTATGGCTGG CACATATCAT GCTCGGAGCC
GTTTGTCCCG TCGTCCCCCG TTCGCCTGCG TCGCGCATCC CGTTCCTGTC CCGTTTTTCG
TCATCCCACA CCCCGGAGTT CCATGTGCAG CATGCCGCCC CCGCCTCGTC CCTGAAACAA
CCCCTGGCCG CCTGCGCCGC GCTGGCCGCG CTGGCCGCCC TGGCACTGGC CGCGCCGGCC
GCGCTGGCGC AGGAAAAGAC GCTGCGCATC GCGATGACCG CAGCCGACAT TCCGCGCACC
CTCGGCCAGC CCGACCAAGG CTTCGAGGGC AACCGCTTCA CCGGCATCCC GATCTACGAC
TCGCTCACGC AGTGGGATTT GTCGCAAGCC GATGCCCCCA GCGTGCTGAT TCCCGGCCTG
GCCACCTCGT GGGCCGTCGA CGCGAAAGAC AAGACCCGGT GGGTCTTCAC ACTGCGCCCC
GGCGTCAAGT TCCACGACGG CTCGGCCTTC GACGCCGACG CAGTGGTGTG GAACGTGCAA
AAGGTGCTCG ACAAGAACGC GCCGCAGTTC GACGCCAGCC AGGTCGGCGT GACCACATCG
CGCATCCCCA CGCTGCGCAG CGCGCGCAAA ATCGACGACC TCACGGTCGA ACTCGGCACC
AGCGAGCCTG ACGCCTTCCT GCCGATCAAC CTGACGAACC TGTTCATGGC CTCGCCCGCG
CAGTGGCGCA AGAAGTTCGA CGCCGCAGCC GGTGCAACGC CGGCCGACAA GGCCAAAGCC
GCCTGGACCG CCTTTGCCGC CGACCCTGCC GGCACGGGTC CGTTCAAGGT CACGCGCTTC
GTGGCGCGCG AGCGGCTGGA GTTGGCCGCC AGCAAAACCT ATTGGGATGC CAGGCGCGTG
CCGAAGATCG GCAAGGTGGT GCTGCTGCCG ATGCCCGAAG CCAACGCGCG CACCGCTGCG
CTGCTGGGCG GGCAGGTCGA CTGGATCGAG GCGCCGGCGC CCGACGCCAG CGCGCAAATC
ACGCAGCGCG GCTTCAAGAT CTACGCGAAC GCGCAGCCGC ATGTCTGGCC GTGGCAGTTG
TCGTTCATCG CAGGCTCGCC CTGGCTCGAC AAGCGTGTGC GCCAGGCTGC CAACCTGTGC
ATCGACCGCA GCGGCATGAA GCAGTTGCTC GGCGGCATGA TGGCCGAGCC CAAGGGCACG
GTGTCGCCGG GCCATCCGTG GTTCGGCAAG CCCGGCTTCG ACATCCGGTA CGACCCGAAG
GCCGGGCAGG CGCTGATGGA GCAGGCCGGC CATTCGGCCG CCAAGCCGCT CAAGGTGAAG
GTGCAGATAT CGGCCTCGGG ATCGGGCCAG ATGCAGCCGC TGCCGATGAA CGAGTTCGCG
CAGCAGTCGC TCAAGCAGTG CTTTTTCGAC GTGCAGTTCG ACGTCATCGA ATGGAACACG
CTCTCGACCA ACTGGCGCAA GGGCGCCAAG GATGCGTCAG CCAACGGCGC CAGCGCGGTC
AACGTCAGTT TCTCGGCGAT GGACCCGTTC TTTGCGATGG CACGCTTCGT CAGCACCAAG
GCTTTCCCGC CGCTGTCGAA CAACTGGGGC TATTACGGCA ACGCCGAGGT CGACCAGTTG
GTGGCCGATG CGCGCACCAG TTTCGACGAC AAGGCGCGCG ATGCCGCGCT GGCCAGGCTG
CACACACATA TCGTGGACGA CGCGCCCTTC GTCTGGATCG CGCACGATGT GGGTCCGCGC
GCGCTATCGC CCAAGATCAA GAACGTGGTG CAGCCCAGGA GTTGGTTCAT CGACATCGCA
ACGATGACCA TGGACTGA
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| Protein sequence | MAARRAEGHS LWLAHIMLGA VCPVVPRSPA SRIPFLSRFS SSHTPEFHVQ HAAPASSLKQ
PLAACAALAA LAALALAAPA ALAQEKTLRI AMTAADIPRT LGQPDQGFEG NRFTGIPIYD
SLTQWDLSQA DAPSVLIPGL ATSWAVDAKD KTRWVFTLRP GVKFHDGSAF DADAVVWNVQ
KVLDKNAPQF DASQVGVTTS RIPTLRSARK IDDLTVELGT SEPDAFLPIN LTNLFMASPA
QWRKKFDAAA GATPADKAKA AWTAFAADPA GTGPFKVTRF VARERLELAA SKTYWDARRV
PKIGKVVLLP MPEANARTAA LLGGQVDWIE APAPDASAQI TQRGFKIYAN AQPHVWPWQL
SFIAGSPWLD KRVRQAANLC IDRSGMKQLL GGMMAEPKGT VSPGHPWFGK PGFDIRYDPK
AGQALMEQAG HSAAKPLKVK VQISASGSGQ MQPLPMNEFA QQSLKQCFFD VQFDVIEWNT
LSTNWRKGAK DASANGASAV NVSFSAMDPF FAMARFVSTK AFPPLSNNWG YYGNAEVDQL
VADARTSFDD KARDAALARL HTHIVDDAPF VWIAHDVGPR ALSPKIKNVV QPRSWFIDIA
TMTMD
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