Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2043 |
Symbol | |
ID | 4692912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2319320 |
End bp | 2320084 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639849807 |
Product | short chain dehydrogenase |
Protein accession | YP_996811 |
Protein GI | 121609004 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.681724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTCG AACAGGCATT CAAGCTCGAC GGCCAAACCG CCGTCATCAC CGGCGCCGCC GCAGGCATCG GCCTGGCGGT GGCCGAACTC TTTGCGCGCC AAGGCGCCAC GCTGGTGCTG CTCGACCGCG ACGCGACGGT GCAGCAGGTG GCGCAGCGCC TGTCGTCCGG GGCCGGCGCG CAGTCTGTCG GCCTGGTCTG CGACGTGACC TGCTCCGACG CGATCGAGGC GGCCGTGGCG CAGGCCGTCG CGGTCAGCGG CCGCCTGGAC ATCCTGGTCA ACAACGCCGG CGTGGGCCTG CTCGCGCCGG CGCTGGAAGC GACCGAGGCC GACTGGGACA AGACCATGGC CATCAACCTC AAGGCGCCTT TCCTGCTCGC GCGTGCCGCA GCCCGCGTGA TGCAACGCCA AGGCCGTGGC CGCATCGTCA ACCTGGCCTC GCAGGCCAGC GTGGTGGCGC TGGAGCGCCA TGCGGCCTAT TGCGCCAGCA AGGCCGCGCT GGTGGCCATG GGCCAGGTGC TGGCCATCGA ATGGGCGCCC TACGGCATCA CCGTCAACGC CGTCTCGCCG ACCGTGGTCG AGACCGCGCT GGGCAAGCAG GCCTGGTCCG GCGCGGTGGG CGAGGCGATG AAGAAAAAAA TCCCCGTCGG CCGCTTCGCG CAGCCCGATG AAATTGCCGC CGCCATTTTG TACCTGGTCA GCGGCCACGC CGGCATGGTC ACCGGCGCCA ACCTGCTGAT CGACGGCGGC TACACCGTGC AATGA
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Protein sequence | MHFEQAFKLD GQTAVITGAA AGIGLAVAEL FARQGATLVL LDRDATVQQV AQRLSSGAGA QSVGLVCDVT CSDAIEAAVA QAVAVSGRLD ILVNNAGVGL LAPALEATEA DWDKTMAINL KAPFLLARAA ARVMQRQGRG RIVNLASQAS VVALERHAAY CASKAALVAM GQVLAIEWAP YGITVNAVSP TVVETALGKQ AWSGAVGEAM KKKIPVGRFA QPDEIAAAIL YLVSGHAGMV TGANLLIDGG YTVQ
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