Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2026 |
Symbol | |
ID | 4693019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2304233 |
End bp | 2305195 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639849792 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_996796 |
Protein GI | 121608989 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCG CTTCGTTGAC CGCAATTGCT TTGGCCGCCA CTTTCGGAGT CTCCGCTTAC GCCGAATTGC CCAAGTTGAA GCAGAAGGAC ACCTACAAGG TCGGCTTTGC CCAGACCGAA AGCAACAATC CCTGGCGCAT TGCGGAGAGC AAGTCGATGC AGGATGTAGC CAAGACCTGC GGCTGGAACC TTGTCTACAC CGATGCGGCC GGCTCGGCGG CCAAACAGGT GGCCGACGTG GAAAGCATGA TCGCCCAGAA GGTGGATTTG ATCGTGCTCG CCCCGCGCGA GGAAAAGCCA CTGATCCCCG CTGTGAGGAA GGCGAAGAAG GCAGGCATCC CGGTGATCCT GATCGACCGC GATGTCGATC CCAAGCTCGC CAAGGTAGGC GTCGACTATG TCACGTTCAT CGGTTCCGAC TTCGTCGACC AGGGCCGCCG CGCCGCGGAA TGGTTGGTCA AGGCGTCGAA GGGCCAAGGG AAGATCGTCG AGCTTGAAGG TTCCACCGGC TCATCGCCGG CCAACAACCG CAAGAAGGGC TTCGACGACG TGATCGCCAA AAACACGGGG CTGAAGATTG TCGCTTCCCA GTCCGGTGAT TTTTCCCGGG ACAAGGGCCG CCAGGTGATG CAGACCCTGC TCCAGGCCCA TCCGGACGTC ACCGCCGTCT ACGCGCACAA CGACGAGATG GCCATCGGTG CGATTTCGGC GCTCGAAGCG GCCGGCAAGA AGCCGGGTCA GGATGTGGTG GTGGTGTCGA TCGACGGCAC CCGGGACGCG CTGACTGCGA TCGCGTCCGG CAAGATGGGC GCCACCGTCC AGTCCAGCCC GTTCTTCGGC CCCATCGCTT GTGAGACCGC AAGGAAGTAC GCCAGGGGCG AAAAAATTCC GGGCTGGGTC AAGGTGGAAG ACAAGTTCTA CGACAAGAGC AACGCTCAAG CCAACATGGC CGACGGCTAC TGA
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Protein sequence | MRFASLTAIA LAATFGVSAY AELPKLKQKD TYKVGFAQTE SNNPWRIAES KSMQDVAKTC GWNLVYTDAA GSAAKQVADV ESMIAQKVDL IVLAPREEKP LIPAVRKAKK AGIPVILIDR DVDPKLAKVG VDYVTFIGSD FVDQGRRAAE WLVKASKGQG KIVELEGSTG SSPANNRKKG FDDVIAKNTG LKIVASQSGD FSRDKGRQVM QTLLQAHPDV TAVYAHNDEM AIGAISALEA AGKKPGQDVV VVSIDGTRDA LTAIASGKMG ATVQSSPFFG PIACETARKY ARGEKIPGWV KVEDKFYDKS NAQANMADGY
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