| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2022 |
|---|
| Symbol | |
|---|
| ID | 4693258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2298740 |
|---|
| End bp | 2300257 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639849788 |
|---|
| Product | filamentation induced by cAMP protein Fic |
|---|
| Protein accession | YP_996792 |
|---|
| Protein GI | 121608985 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3177] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.486943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGGT ACGAATTCTT GCTGTCAAAG ATCCCGTTGC GCATGCCGGA ACTGGACAAG
CCCGCCCGGA TCAAGCCAGT GACCCGTGTG GAGGAGATGG CCGACCTGAT CGCGATACCC
AAGGCGATCG CGCCCGCCAC CGACTCCATT CTCCCGCACC TGCTCTTCGC GCTGAAGCAC
GAGTCGGTGA AATTGGCAAT CCTGCATGAG GCGCTGCGGC TGCTGCCGGC CCAGGACATC
GTCGACGCCA TCGTCGACGC GCCGGCGGGC GCCTACGTGC GCCGCGCGGC CTACCTATGG
GAAAAGGTCC ATGGCGTCGA ACTGGATCTG CCGCTGGCGG GGCCTGCGGG CAACTATGTC
GACTTCTTCG ATTCGAAGGT GTACTTCACC GGCCAGGTCT GGGAGCGCAG CCAGAAGTAC
CGGATCAATT TCAACGGCAT CGGGCCCTAC GAGTTCTGTC CAGTCGTTCG GCGCGATGAC
GAGCTCGAGC AGGAGGGCGA GTCCATCCTG CGCTCGTTGC GCGAATGGGC GACGGCGCCG
GAGAACGAGC CGCTGATGGA CCGGGTGATG GACTGGGCCT ACCTCAGCGA GACCCGCGAC
TCCTATGCCA TAGAGAACGA AGTGCCGAGC CCGGAGAAGG AAAAGGCGTT TCTGCAGGCG
ATGGCGCATC TTCGCGACCG CGCGCCGCTG ACGGAAGGCT ACCTGGTCGG ACTGCAGAAC
GCCGTCATCA GCTCGCCTCT GCGGGCAGAG AGGGGCTTGC GCGGTACCCA GAACTGGCTG
CAGCGTGGCG GGCGCGGCGC GTTGGCCGTC CGCTATGTTC CACCTTCGCC GGAGCACATG
CTGCCCTTGA TCGACGGGCT GATGCGCATG GCGAACGCCA AGGACGACGT TCCTCCGCTG
ATCAAGGCGG CGCTGGTGAG TTTCGGCTTC GTCTTCGTCC ACCCCTTCAT GGACGGCAAT
GGCCGGCTCT CGCGGCTGCT GGCGCACCAC TGCCTGCACA TGAAGGGGGC GCTGCCGGAC
GTGAAGGGCA GCCCGGCCAT CCTGCCGCTG TCGGTGGCCA TGAAGCAAGA GGAGCGGAGG
TACCTGGCTG CGTTGGAGCG CTTCAGCACA CCGGCGCGTG CGCTGTGGGA CGTGCAGTTC
ATCGGCGACG GAGACTTCGT CTTCGACTTC CGCTCTACGC CGATGGTCTA TGCCCACTGG
TCGGGGGCCC ATGCCGCGGC CTTCGTGACC CGATGCGCGC GTGTCGCATT GCAGCAGTCC
CTTGTCGATG AGGCGCAGTA CCTTCAGGCC TACGATCTGG CCTATGAGCG TATCGACAAG
CAGTTCGACC TGCCGAACCG GACGATCAAT CTGCTGATCC AATGGATCCA CCGGAACAAC
AACAGAATGC CGGAGCAGCG CAAGACGGCC AAAGAAGTGG CCTATGTCCT CTCCGCAAAG
GAGCTGAGCC GGATCGAGGC CATCGTCGCG CAGGCCTTTG CGTCCCATGA AGGAGGCCCT
GCCCAGGAAG AGCACTGA
|
|---|
| Protein sequence | MVGYEFLLSK IPLRMPELDK PARIKPVTRV EEMADLIAIP KAIAPATDSI LPHLLFALKH
ESVKLAILHE ALRLLPAQDI VDAIVDAPAG AYVRRAAYLW EKVHGVELDL PLAGPAGNYV
DFFDSKVYFT GQVWERSQKY RINFNGIGPY EFCPVVRRDD ELEQEGESIL RSLREWATAP
ENEPLMDRVM DWAYLSETRD SYAIENEVPS PEKEKAFLQA MAHLRDRAPL TEGYLVGLQN
AVISSPLRAE RGLRGTQNWL QRGGRGALAV RYVPPSPEHM LPLIDGLMRM ANAKDDVPPL
IKAALVSFGF VFVHPFMDGN GRLSRLLAHH CLHMKGALPD VKGSPAILPL SVAMKQEERR
YLAALERFST PARALWDVQF IGDGDFVFDF RSTPMVYAHW SGAHAAAFVT RCARVALQQS
LVDEAQYLQA YDLAYERIDK QFDLPNRTIN LLIQWIHRNN NRMPEQRKTA KEVAYVLSAK
ELSRIEAIVA QAFASHEGGP AQEEH
|
|---|
| |