Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1978 |
Symbol | |
ID | 4692101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2247901 |
End bp | 2250213 |
Gene Length | 2313 bp |
Protein Length | 770 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639849744 |
Product | outer membrane protein |
Protein accession | YP_996748 |
Protein GI | 121608941 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02059] cyanobacterial long protein repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.206942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACCA CCCTCACCAT CAACGAAGAA GTCATCAAAG CCGGCGAGAC CGCCGAGGTC AAGTTTGCTT TCGAGCCCAA TACCGACTAC TCCCTCGCCA TCGGAAGTGA CGGTCTGATC CAGGGTCTGA CCTCCACTGG CGGCTCCGTC CGCAACGTCA TCGATCGTGG AGTCATCTAC GGTCGCCGCG TCTATACCGC CACATTCACG CCTGACGCGA ACCTGGACAG AACCGAGTGC AGCCTCGTCT ACGACGTTGC TGGCACCGGC AATGACGCCA CCAGCGCCAC CTTCATCGTC GACACCCGGG CGCCCACTCT CACGGGCACC CCGACGATCA GCAACCCCAA CCTGACCCGC GCCAACCAAG TAAGCACCAT CACCTTTGCC TTCTCCGAGC GGATAGCTCA GACCTCCTTC ACGGCTCAGA CCTCCTTCAC GACGGCTGAC CTGACGATAC CGGCGGGCAT GGGCACGCTG GAGAACCTGC GCACCACCGA CGGCGGCAGG TCTTGGCAGG TAGACCTGAG GGCGCCGGCC AACCTGGCGG CCAACACCGA AGCGAAGGAC CTGCAGATCG GCATCAACAT GGCCGGCATC ACCGATGTCG CGGGCAACCC GGGCACAGGC AACGTCAACC TCGTCACCTA CCACATCGAC AACAAGCCGC CCAGCGCCAC CATCGACGTT ACGCTCTTCC CCGGCACGAT CGACAACGGC AGACTGATCA CCATTACCAT CACCTTCGAC GAGGAAGTCA CCGGCTTTAC GGCAGACAAC ATCGATTTCA GCAACGTCGA TGTCGGTGCC CGTCCCGGCG CCGACCAGAC AGGAGCGCTG AACCGCTCAC CCGACGGCCG CACCTACACC ATCACCTACC CGGTCGCTTC GGGCATCGAG GATGCCACCA ACACCGTCCG CCTGCTCAAC CTCCATACCA TTCGTGACAC CGCAGGCAAC GCCGTAGCGG TCAACCCCAC CAGCAACAAC TTCGAGATCG ACACCCGGGC GCCCACGGTC ACGGTCACGA TGGACAAAGA GCGCCTGACC GCTGGCGAAA CCGCCACCGT CACGTTCACC TTCAGCGAGA CCGTCCCCGG CTTCAGCGAC ATTTCCATCG TTATGGGTGG CGCCAACGGC TCTCTGAGCA ACCTGAGGCA GACCACAGCC GACGGCAGAA CCTGGACAGC CACCTTCACC CCCACGGCCA GCCTGTCCAA CGCCCGCAGC CAGATCAGCG TGAATTACGA GGGCATCAGA GACCGCTACG GCAACGGCGG CAGTGGTACG AGCGCAGCCC ACAACTACAC CGTAGACACC GCCGTTTTTG CCATCATCAG CGCCACGGTG AACGGCAGGC AGTTGGTATT GCAGTACAGC GATGAAACCG CGCTGGACCC GGAGCAGACC CATAACGCGC CCAACGATGC GTTTGTGGTG CTGGTCGATG GCGTGCGCAA CAACGTCACC GGCGTGCTCG TGGATGCAGC GGCCAAGACC ATCACGCTGA CGCTGGCCAA CGCCGTGACC TGGGGCCAGC AGGTGAGCGT CGCCTACAAC GATCCCAGCA CCGGCAACGA CCCGCAAGCG GTGCAGGAGG CCACCACCGG CAACGACGCG GCCAGTTTCG CGGCCAAGCC GGTGACCAAC CTCGCCCCGT CCCCGGTCGC ACCCGCCACA CCGGGGGCGT CTGGAGGGTC TGGAGGGTCT GGGGCGCTGG ACTCCGACTA CGACAATGTG CCCAACGCCC AGGAAAACCA GGCCCCCGGC CTGCTGCGCC CCGATGGCTC GGCCGGCACG GATGGCGACG GCAACGGCGA CGGTATCCGG GACAGTGAGC AGGTCGCCGT CAGTTCGACC CGCGACCAGA CCCTGGTGGC CGGCAGCCAG GACGGCAAGG TGATCCCCGG CAGCAACGCG CGCATTACCG AACTGGTGCG CAGCGATGCC CCGACCAAGC TGCCCAAGGG CATGGAAATG CCGCTCGGTC TGACGCAATT CAGGGTCGGC CTGTCCGAAG GCCGCAGCAC CGAGAGCTTC AGCCTGTATG TGGACCCGGC CACCGGCGCC ACCGGCTACT GGGTCAAGAA CAGCGCCGGC ACCTGGGTGA ACCTGGCCAG CGAACCCTAC GGCGGCAAGG TGAGCAGCGA AGGCGGGCGC ACGCGGCTGG ACTTTCAGAT TCAGGACGGC GGCCAGTACG ACGCCGACGG ACTGGCCGAT GGCAACATCA CCGCCCTTGG CGCCGCAGCG AAAATGCCGC TGTCCATCGT CGGGCAGTCG GCCCAGGTCG AGTCGCATGG CTTTTGGTTC TAA
|
Protein sequence | MATTLTINEE VIKAGETAEV KFAFEPNTDY SLAIGSDGLI QGLTSTGGSV RNVIDRGVIY GRRVYTATFT PDANLDRTEC SLVYDVAGTG NDATSATFIV DTRAPTLTGT PTISNPNLTR ANQVSTITFA FSERIAQTSF TAQTSFTTAD LTIPAGMGTL ENLRTTDGGR SWQVDLRAPA NLAANTEAKD LQIGINMAGI TDVAGNPGTG NVNLVTYHID NKPPSATIDV TLFPGTIDNG RLITITITFD EEVTGFTADN IDFSNVDVGA RPGADQTGAL NRSPDGRTYT ITYPVASGIE DATNTVRLLN LHTIRDTAGN AVAVNPTSNN FEIDTRAPTV TVTMDKERLT AGETATVTFT FSETVPGFSD ISIVMGGANG SLSNLRQTTA DGRTWTATFT PTASLSNARS QISVNYEGIR DRYGNGGSGT SAAHNYTVDT AVFAIISATV NGRQLVLQYS DETALDPEQT HNAPNDAFVV LVDGVRNNVT GVLVDAAAKT ITLTLANAVT WGQQVSVAYN DPSTGNDPQA VQEATTGNDA ASFAAKPVTN LAPSPVAPAT PGASGGSGGS GALDSDYDNV PNAQENQAPG LLRPDGSAGT DGDGNGDGIR DSEQVAVSST RDQTLVAGSQ DGKVIPGSNA RITELVRSDA PTKLPKGMEM PLGLTQFRVG LSEGRSTESF SLYVDPATGA TGYWVKNSAG TWVNLASEPY GGKVSSEGGR TRLDFQIQDG GQYDADGLAD GNITALGAAA KMPLSIVGQS AQVESHGFWF
|
| |