Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1940 |
Symbol | |
ID | 4695328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2175064 |
End bp | 2175741 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639849707 |
Product | hypothetical protein |
Protein accession | YP_996711 |
Protein GI | 121608904 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.339964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCACTC TCGCTTCTGA AGAAGCCGGA ACGATGAAAG TCCCTGCCGT CAGTCTCATG ACGGAGGCGC AAGGATTTGA ATGGAGCAAG TCCCGAACTG GTTTCCCTTG GCACCATGAT TCACTGAGTT TCCGTTACAT CCGGCCCCAG GACTCGGCTT ACAGTATTTG GATTCCCCTC GACAAGGCGG ACGTGGAGCG CGGAGGCGGC GGTATGGCAT ATGTACCCGA AAACATTTTG TCTGCAAAAG CCAATTTTCA GATTTCCAGC ATGTTGTCCT CGAAAATGGC GCGCGGGGAG TCACTCGACG AGATTGCCGC CCCGTTGGGC CAAATTTTCA GCACGCCGAG CTTGCTTACG GGGCTCATGG AGGAACACCA GGAGGAGGAC GACTTCGAAC CGGGCGACGC CTTTTTCTTT ACCAAGTCGG CTTGGCACCG ATCTGGCCCA TTAAAGACCG AAGGGCCCGA TTTCAGGCTG GCGGTAACGA TTCGATTCCT TGACTGGCGT TCCCGGTTGG ACCGCATCAT GTTCGACGGC GAATCCGAAA GCGGCGGTGG TGTGGGCATG GGCACCGACT GGGGGAGACC CGAGCAAACG ACATACGGAG CACAATTCAC GGACATTGCG AACGGTGAAG AAATCCGTAA CTCGCGCCAT TGCGGGGTGA TCATCTGA
|
Protein sequence | MTTLASEEAG TMKVPAVSLM TEAQGFEWSK SRTGFPWHHD SLSFRYIRPQ DSAYSIWIPL DKADVERGGG GMAYVPENIL SAKANFQISS MLSSKMARGE SLDEIAAPLG QIFSTPSLLT GLMEEHQEED DFEPGDAFFF TKSAWHRSGP LKTEGPDFRL AVTIRFLDWR SRLDRIMFDG ESESGGGVGM GTDWGRPEQT TYGAQFTDIA NGEEIRNSRH CGVII
|
| |