Gene Veis_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1935 
Symbol 
ID4692438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2170664 
End bp2171746 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content67% 
IMG OID639849702 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_996706 
Protein GI121608899 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.540943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGC TCCCCTACGC CCTCACCCGC CCCTTTCTCT TTGGCCTGGA CGCCGAAGCC 
GCCCACGAGC TCATCATCGA CCTGCTGGCA CGCGGGCAGC GCACGCCGCT GCAATGGGCC
TGGTGCAACC AGACCGTGGA TGACCCGATC GAACTGGCCG GGCTGCGCTT TCCCAACCGC
GTCGGCCTGG CTGCGGGCCT GGACAAAAAC GCCCGGTGCA TCGATGCGCT GGGCGCGATG
GGCTTCGGCT TTGTGGAAGC GGGTACGGTC ACGCCCCAAG CGCAGCCGGG CAACCCCCGG
CCACGCATGT TCCGCCTGCC CGAAGCCCGG GCGCTGATCA ACCGCCTGGG GTTCAACAAT
GCCGGACTGC AAGCCTTTGT GCACAACCTG CAGCAGTCCC GCCTGCGCGC TGCAGGCTCT
GCGCTGCGGC TGGGTTTGAA CATCGGCAAA AACGCCAGCA CCCCGATGGC GCAGGCCAGC
AGCGACTACC TGGCCTGTCT GGAAGGCGTC TACCCGCATG CGGACTATGT GGCGCTGAAC
ATCAGTTCAC CGAATACACA GAACCTGCGC ACCCTGCAGG GCGACGCGGC GCTCGACCAC
TTGCTCGGCG CAATCGCCGA GCGCCGCGCA ACGCTGGCCG CGCGGCATGG GCGGCGCGTG
CCGGTGTTCG TCAAGATCGC CCCCGATCTG GATGAAGCGC AACTGTCGCT GATGGCCGCC
ACATTGCAGC GGCATGGCAT CGACGGCGTG ATTGCCACCA ACACCACCAT CGATCGTGCC
GTCGTGCAAG GCCAGCGCCA CGCGCAGGAA AGCGGCGGGC TCAGCGGCGC CCCCGTGCTG
CAAGCGAGCA ACCAAGTCAT CGGGCAGCTA CGCGCCGCCT TGGGCAAGGG CTTTCCGATC
ATCGGCGTGG GCGGCATCAT GAGCGCCGAA GATGCGGTGA GCAAGATCCG CGCAGGCGCA
GACTTGGTTC AAATCTACAC CGGCCTGATC TATGAAGGCC CGGCGCTGGT CGTGCAGGCG
GCCCGGGCGA TCAAGGCCAT GGGCGGCTGC GGGCCTGTCA TTGCGTTGCC AAATCGTTCG
TGA
 
Protein sequence
MPLLPYALTR PFLFGLDAEA AHELIIDLLA RGQRTPLQWA WCNQTVDDPI ELAGLRFPNR 
VGLAAGLDKN ARCIDALGAM GFGFVEAGTV TPQAQPGNPR PRMFRLPEAR ALINRLGFNN
AGLQAFVHNL QQSRLRAAGS ALRLGLNIGK NASTPMAQAS SDYLACLEGV YPHADYVALN
ISSPNTQNLR TLQGDAALDH LLGAIAERRA TLAARHGRRV PVFVKIAPDL DEAQLSLMAA
TLQRHGIDGV IATNTTIDRA VVQGQRHAQE SGGLSGAPVL QASNQVIGQL RAALGKGFPI
IGVGGIMSAE DAVSKIRAGA DLVQIYTGLI YEGPALVVQA ARAIKAMGGC GPVIALPNRS