Gene Veis_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1911 
Symbol 
ID4690554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2139991 
End bp2140509 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content69% 
IMG OID639849678 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_996682 
Protein GI121608875 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.14207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCG CCAGCAGCCA CCGCGTCTGG CGCCTGGGCG TCAACATCGA CACCGACGCG 
CTCGCGCCCG GCCACGCGAT GAAGCACGGC ACCGACACCA TCGCCCGGCA CTGCCTGGAG
AGCATCCGCC CCGAATTCGC GCGCCAAGTG CGCCCGGGCG ACGTGATCGT AGCCGGCGCC
AACTTCGGCA TCGGCTCGTC ACGCGAGCAG GCCGCAGCCG TGCTCGTGCA GTTGGGCGTG
GCGGCGGTGA TCGCGCCGTC GTACAGCGGT CTGTATTTCC GCAACGCCTT CAATCTGGGT
CTGCTGCTTC TAACCTGCGC CGAAGCCACA GTCTTGCGCG AAGGCGATCG CATCGCCATC
GACATTGTGC GCCCCGCGCT CGTGGCACCC GACGGCAGGC TGCTGGCCTG CGAACCGGTG
CCCGGGTTCC TGATGGACAT GGTGCGCGCC GGCGGACTGC TGAACCAGCT ACGCCAGCGC
GCTGGCCGAC CCGCCTTCAC GAAAGCCCCC GATGTCTGA
 
Protein sequence
MNAASSHRVW RLGVNIDTDA LAPGHAMKHG TDTIARHCLE SIRPEFARQV RPGDVIVAGA 
NFGIGSSREQ AAAVLVQLGV AAVIAPSYSG LYFRNAFNLG LLLLTCAEAT VLREGDRIAI
DIVRPALVAP DGRLLACEPV PGFLMDMVRA GGLLNQLRQR AGRPAFTKAP DV