Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1911 |
Symbol | |
ID | 4690554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2139991 |
End bp | 2140509 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639849678 |
Product | 3-isopropylmalate dehydratase, small subunit |
Protein accession | YP_996682 |
Protein GI | 121608875 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.14207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCG CCAGCAGCCA CCGCGTCTGG CGCCTGGGCG TCAACATCGA CACCGACGCG CTCGCGCCCG GCCACGCGAT GAAGCACGGC ACCGACACCA TCGCCCGGCA CTGCCTGGAG AGCATCCGCC CCGAATTCGC GCGCCAAGTG CGCCCGGGCG ACGTGATCGT AGCCGGCGCC AACTTCGGCA TCGGCTCGTC ACGCGAGCAG GCCGCAGCCG TGCTCGTGCA GTTGGGCGTG GCGGCGGTGA TCGCGCCGTC GTACAGCGGT CTGTATTTCC GCAACGCCTT CAATCTGGGT CTGCTGCTTC TAACCTGCGC CGAAGCCACA GTCTTGCGCG AAGGCGATCG CATCGCCATC GACATTGTGC GCCCCGCGCT CGTGGCACCC GACGGCAGGC TGCTGGCCTG CGAACCGGTG CCCGGGTTCC TGATGGACAT GGTGCGCGCC GGCGGACTGC TGAACCAGCT ACGCCAGCGC GCTGGCCGAC CCGCCTTCAC GAAAGCCCCC GATGTCTGA
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Protein sequence | MNAASSHRVW RLGVNIDTDA LAPGHAMKHG TDTIARHCLE SIRPEFARQV RPGDVIVAGA NFGIGSSREQ AAAVLVQLGV AAVIAPSYSG LYFRNAFNLG LLLLTCAEAT VLREGDRIAI DIVRPALVAP DGRLLACEPV PGFLMDMVRA GGLLNQLRQR AGRPAFTKAP DV
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