Gene Veis_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1908 
Symbol 
ID4692085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2136963 
End bp2137727 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID639849675 
ProductABC transporter related 
Protein accessionYP_996679 
Protein GI121608872 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.240732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CGCGGTCGCC CGAAGGCGCC CATGCCGCAG CCGAAGGCGC GCCAGTGGGC 
GCACTGCTCG ACATTCGCGG CCTGTGCGGC GGCTACGGCC GCGTCCAAGT GCTGCGCGGC
GTGGACCTGC AGGTCCACGC CGGCGAAATG GTCGCGCTGC TCGGCAGCAA TGGCGCGGGC
AAGACGACCC TGAACAAGAC GGTCTGCGGC CTGTGCCGCG CATGGAGCGG AACCATTCGC
TTCGATGGCA AGGACCTGAG CGGCGCGCAT TACCGCGCGG TGGTCAAGGC CGGCCTGATC
CAGGTGCCCG AGGGGCGCAA GGTATTTCCC GACCTCAGCG TGCGGGAGAA CTTGGAACTG
GGCTCCTTCA CCCGCGCCCA CGAACGCCGC GCGGCCAATA TCGAGAAGAT GTTCCACCTC
TTTCCGCGGC TGCGCGAATG CATGGCGCAG CGCGCCGGCA CCATGAGCGG CGGCGAGCAG
CAAATGCTGG CCATCGCGCG CGGACTGATG GCCGAGCCCG TGCTGCTGAT CCTCGACGAA
CCCTCGCTCG GCCTCGCGCC ACGGCTGGTG CAAGAGATGT TCGCGCTGAT CCGCACGTTG
CGCGACGGCG GCCTGGCGGT GCTGCTCGTC GAGCAGAACG TCGGCCAGTC GCTGGAGATC
GCCGACCGCG CCTGCGTGCT GGAGAACGGC AGCATGCGCT TTTCCGGCAC GCCCGAGGCG
CTGCTCGGCA GCGACATGCT GCGGCGTGCA TACCTGGGGC TATGA
 
Protein sequence
MSAARSPEGA HAAAEGAPVG ALLDIRGLCG GYGRVQVLRG VDLQVHAGEM VALLGSNGAG 
KTTLNKTVCG LCRAWSGTIR FDGKDLSGAH YRAVVKAGLI QVPEGRKVFP DLSVRENLEL
GSFTRAHERR AANIEKMFHL FPRLRECMAQ RAGTMSGGEQ QMLAIARGLM AEPVLLILDE
PSLGLAPRLV QEMFALIRTL RDGGLAVLLV EQNVGQSLEI ADRACVLENG SMRFSGTPEA
LLGSDMLRRA YLGL