Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1907 |
Symbol | |
ID | 4693840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2136205 |
End bp | 2136966 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639849674 |
Product | ABC transporter related |
Protein accession | YP_996678 |
Protein GI | 121608871 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.241879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGAGC CTGTTTTGCA ACTCGATGGC GTCTCGCGCG CATTCGGCGG CCTCAAGGCC GTGCAGAACG TGAGTCTGGC CGTGCAGGAA GGCAGTCTCA CGGCGCTGAT CGGCCCGAAC GGCGCCGGCA AGACCACGCT GTTCGCGCTC ATGTCCGGCT TCCTGAAGCC CGACACCGGC AGCGTGCGCC TGGCCGGGCA GGACATCACC GGCCGCGCGC CGCATCGCAA TGCCGCGCTT GGCATGACGC GCACGTTCCA GATCGTCAAG CCCTTTGCCG CGCAGACCGT GCGCGAGAAC ATCGCGGTGG GCGCACACCT GCATCTGCGC CACCGCGCCG AGGCGCTGGC CTGTGCCGAG ACCGTCGCAC GGCGCGTGGG GCTTGGCGCC CAACTCGACA AGCCCGCTTG CGATCTGACG GTGGCCGGCT GCAAGCGCCT GGAACTGGCC CGCGCGCTCG CCACACGGCC GCGCCTGCTG CTGCTCGACG AAGTGCTCGC AGGGCTGAAC CCGCAGGAGA TCTCCGGGAT GATGCCGGTG GTGCGCGGCA TCGCCGACAG CGGCGTGACC GTGCTGATGA TCGAGCATGT GATGCAGGCC GTAATGAACC TGGCCGAGCA TGTGTGGGTG TTGGCGCAGG GCCGGCTCAT TGCCGAAGGT AGCCCGGCGC AGGTTGTCTG CGACGACCGG GTCATCCAAG CCTACCTGGG CCATGGCACC GCTGCGCGGC TGCGCAAGGT CGCTGCGGGA ACTGCGGCAT GA
|
Protein sequence | MTEPVLQLDG VSRAFGGLKA VQNVSLAVQE GSLTALIGPN GAGKTTLFAL MSGFLKPDTG SVRLAGQDIT GRAPHRNAAL GMTRTFQIVK PFAAQTVREN IAVGAHLHLR HRAEALACAE TVARRVGLGA QLDKPACDLT VAGCKRLELA RALATRPRLL LLDEVLAGLN PQEISGMMPV VRGIADSGVT VLMIEHVMQA VMNLAEHVWV LAQGRLIAEG SPAQVVCDDR VIQAYLGHGT AARLRKVAAG TAA
|
| |