Gene Veis_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1903 
Symbol 
ID4691363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2132315 
End bp2133115 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID639849670 
ProductUbiC transcription regulator-associated domain-containing protein 
Protein accessionYP_996674 
Protein GI121608867 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.380423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTAA TGCACTTGCC GAAATACCAC CAGATTTACT TGGTGTTGCG CGAGCAACTG 
CACGAAGGGC ATTTTGCGCA GGGGCTGCCC GGTGAACTGG CGCTGATGGC GCAGTTCGAC
GTGGCGCGCG TCACGGTGCG GCGTGCGCTC GAACAATTGG CCCGCGAAGG GCTGATTGCG
CGCAACCCGG GCCGCCGCAC GCGCGCGCTG GCGCCCCCGG CCAGCAGCGA TGGCCCCAAC
GGCCACGGCA TGGAAAGCGC CCATCTGCAC GGCCTGCTTG AAAACCTGGT CACCATGGGC
CTGCACACCT CGGTCAACGT GATCGAGGTG GCCACCATCA CCGCCTCGAC CCCGGTGGCC
CAGGCGCTGC AACTGCAGCT TGGCGACCCG GTGCAGAAGG CCGTGCGCGT GCGTTCTACC
AGGGAAGGCC CCCTCTCGCA CATCACCACC TACGTGCCCG ACTCGATTGC GCGCCGCTTC
GGCCGCCGGG AACTGTCGAA GAAGCCCATC CTTGTGCTGC TGGAGGAATC GGGTGTCAAG
GTGGGCCGGG CGCACCAGAC CATCTCTGCG CGGCTGGCCG ACAACACGCT CGCGCAGCAC
CTCGACATGT CGGTCGGCGC GGCCCTGCTC GCAGTGCGCC GCCTGATCTA CGACGCAGAC
GGGCAGCCTG TGCAGTGGCT GCATGGCCTG TACCGCCCCG ACCGCTACAC CTACGAAATG
CAGCTCTCCC GCATGGGCAG CATCGATGCG AAGGTGTGGA CCAGCCAGGA CATGTCGGCC
CGGCCAGTCC AGTTCAACTG A
 
Protein sequence
MSLMHLPKYH QIYLVLREQL HEGHFAQGLP GELALMAQFD VARVTVRRAL EQLAREGLIA 
RNPGRRTRAL APPASSDGPN GHGMESAHLH GLLENLVTMG LHTSVNVIEV ATITASTPVA
QALQLQLGDP VQKAVRVRST REGPLSHITT YVPDSIARRF GRRELSKKPI LVLLEESGVK
VGRAHQTISA RLADNTLAQH LDMSVGAALL AVRRLIYDAD GQPVQWLHGL YRPDRYTYEM
QLSRMGSIDA KVWTSQDMSA RPVQFN