Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1890 |
Symbol | |
ID | 4692692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2113558 |
End bp | 2117751 |
Gene Length | 4194 bp |
Protein Length | 1397 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639849657 |
Product | hypothetical protein |
Protein accession | YP_996661 |
Protein GI | 121608854 |
COG category | [S] Function unknown |
COG ID | [COG4269] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.608701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.552077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCCCC ACCCAGCCAG CGGCGCAGCC GAATCGATGC CAAGCCCGCT GCCCCAGGAG ATCGAAGCCC ACCCGTTGGC GTTCACCGGC AGCGGCGGCG CGTATTTCCA GGTGTGGATC GTCAACCTGC TGCTGTGCTG CGTGACGCTG GGCCTGTACA TACCCTGGGC ACGCCGCCGC ACGGCCCGGT ATTTCTACCG CCACACCCTG GTGGCCGGCA GCCCCCTCGA ATTCACCGGA CGACTGCGCG TGCCGGTGCC CGGCTTGGCG CTGGTGGCCA TGCTCGTCCT GGGCTGGGGC ATCGCCTGGA GCCTCGGGCT GTTCTGGAAA TTGGATATTT GCCTGGCCTA CGACTCTGCC CGGAGCGGCG GGCCGTGCCA GAAGATCACG GCAGGGTTTC TGGCCGGTTT TCTGCTGAGC ATCGTGCTGC TGGCGCCCCT GGTCTGGGGC AGCGCGATGC GCTTTCGCCT CGATGCGACA CGCTGGCGCG GCCTGCGTCT GCAATCGGCG GCCAGTTGGC GCGACATCTA CCGCGCCAGT TGGCCTTTGT GGGTGCTGGC ACTGTCGTGG CTCGGCCTGT ACCTGGCCCG ATCCGCCACT GGCGCGATGC CGATCGGCCG CCAGGTGCTG GCGCTGTTGC CGGCGGGCCT GATGGGCATG TTCTGGCAAG GCGCCGGACT GACCGATACC CTGGCGAAGG TCTTCAAGGC AAAAATCGTC ACCTCCGACG GGCTCGCATG GCTGCTGCTG GGCCTGATGC TGGCGCTGCT GTGCCTCGCG CGGCTGGACT ACGACTACAG GCGGCTGCGG GTGTGCAAGG CCCAATCGGG CGCCGGGCAG GGCCACTGGA GGCAGCCGGA GTACCGGGAC TGCGTCAATG TCTGGCTGGC TGCGGTGGCG CTGTTCGTGC TGAGCGCGCC CATGCTGGGC ATGCTGGTCG GCGCGGCACT GAACGCCGTG CTGCCGAAAG ACGCCTGGGT CTTCATCCTC TTCGGGGTCA TGGCGACCAT GGGCAAGTTC TACCAGCTGA TCTTCAAGGA CCCCACGGAT GTCGTGGTCG TCGGGTCGAT TTTGTTCCTG CTGTTGCTGG TGCTGTCGGC ACCCGCCCGT GCGTACCGCG AGGCACGGAT GTTCCAACTG ATGTGGAACC ACATCGGCAT CGGCCAGGTG GCGCGCTTCA AATGCCGGTT GTCCAGCGTC GACTTTGTGC TGGCGCGCTT CGGGAACCTG CTGCTGACCC TGCTCACGCT CGGGCTGTAC CGCCCGTTGG CGCGCGTCAG CGAATACCGG ATGAAGCTCG AATCGGTGAC CCTGTATGTC AAGGGCGGTG CCGGGCAGGT GGCTGGCGCT CCCGACGATG CGCGCGCCGG CGACGCGGCG GGTCGGGACT CGATCGGGCA CGCAGCGCCC CGCGACCCGG CCCATGACGC GGGCCTTGCC GCCGGGGCGC AGGCCAGCGG CGCGCCCGAA TCGGCGCCCA TCCTGGTGCC AGGCCCGGTG CCAGGCGCGA TGCCACGGAA CGGCTATACC CACCCGCTGG CGTTCACCGG CGGCACGGGC GCGTATTTCC GGGTGTGGAT CGTCAACCTG CTGCTGTGCT GCGTGACGCT GGGCCTGTAC ACGCCCTGGG CGCGCCAGCG CACGGCGCAG TATTTCTACC GCCACACCCT GGTGGCCGGC AGCCCCCTCG AATTCACCGG ACGACCGCGT GGGCAGGTGC TGGGCTTTGT GCTGCTGCTC CTGCTGTGGC TGCTGCTCAT GCTCGCGCTG GCCTCCGGCA TCCTCTGGAG CGCTTGGCTG CACCAGATGC TGCGGTGGAT CCCGATTTTC GACCTGCGGA TCAAAGGCGA CGAGTTGCCC TGGCTGTTCC GGGCCGCCGA ATGGATCCCG ACTTTCGGCA TCTTCGCAAG CATCGGCCAC AAGAGCATGG CCGTGCCTGT GCTGGCCGGT GCGGCGCTGC TGCCCTGGGT CTGGGGCAGT GCGATGCGCT TTCGCCTCGG CGCCACCCGC TGGCGCGGGC TGCGTCTGCA ATTTGCCAGC CATTGGCGCG AGATCTACGG CGGCAGCGGA CTTTTGTGGG TGCTGGCGCT GCTGTGGGGG GGGCTGTCCT GGAGTCTGTA CTTTGGTTTT GGTCCGCAAC CTTTTTCGAT GCCCGAACTG CTGGCCGACA AGCCAGCCAT CGCCAGGTTC ACGGTCATGA TCGCCTGGCT GCTGGGCGCG GCGCTGACGC TGCTGTGCCT TTGCCGCCTC GACTACAACC GCCTCGACCT GCTGTTGCGC AAGACCCGGG TGGGCGCCGA GCCGGTGCGC CACAAGAGGC CGGTGCTCCC GAACGTCATG GAGACCTGGC TGGTCACGGT GATGCTGTGC ATGCTGGGCC TGTCGCTGGG TTTCGTGGTC TGGAAATGCC TGCCGGGCGG CTACTTCGAC AAACCCCCAT TTTTCGGGGT GGGGCGCAGC CGCAACGGCT CGGCGAGCGT CATGTCCGTG CTGTACAGGG TCGTGATCGT TGTGCTGCCG CTGCTGCTGT TGTCGGCCCC CGCCCGGGCG TACCGCGAGG CGCGCATGTT CCAACTGGTG TGGAACGGCA TCGGCGTCAA CCAGGCCGCG CACTTCAAAT GCCGGTTGTC CAGCGACCGC TTTGTGCTGC TGCGCATCCA GAACCTGCTG CTGACCCTGC TCACGCTCGG GTTCTACCGC CCGCTGGCGC GCTTGAGCGA ATACCGGATG AAGCTCGCAT CGGTGACGCT GCATGTCACC GGCGATCTGG ACCAAGTGGC CGGCGCCATG CTGCGCCAGC AGACGGGCCT TGGTGCCGTG CCGGACTTCT CGGGCCGGCG CGCGCTGCGG CACTACTTGC AGCGCGCGCA ATGGCTGGCG CCGCTTCGGC GCCTGGTGCA CAAGCTCGGG CCGGAAAGCC CGATACCGGA AGGCGGCAAA CTCCCCCCTC TGGCGTTCAT CGGCAGCGCT GGCGCGTATT TCCCGGTGTG GCTCGTCAAT GTGCTGCTGT GCTGCGTGAC GCTGGGCCTG TACGCACCCT GGGCACGCCG CCGCACGGCC CGGTATTTCT ACCGCCACAC CCTGGTGGCC GGCCGCCCCC TCGAATTCAC CGGACGACCG CGCCCGATGC TGCTGATCTT TGTGCTGCTG CTCCTGCTGG CTTACGGCGC CATGGCCAGT TTGTCCACTT TGATCTATCT GATCTATGAA AGAGGAGAGC TCGCGCTCTA TGGCATGGCC GAAGGAGCAA CCTTTTCGGC CTACGACATC ACCGGGACAT TCGGGCAGAA CCTGGCCGTG GCATCGTTTG TGCTGGTCGG TGCGGCGCTG GCGCCCTTCT TTTGGGGCCA TGCGATGCGC TTTCGTCTCG GGGCCACAGT CTGGCGCGGC CTGCATCTGC AATTTGCCGC CGGCTGGCGC GAGGTCTACC GCGCCAGCCG GCCGCTGAGG GTGATGGCGC TGTTGTGGAC GGGCCTGTTC CTGTACATGC GGACGCTGGT GCCCGGGCTG GCCGATTCGT TCCTCACCTG GCGCGCATTG GTGTTGCCGG CCTTGGTGCT GACGCTGCTG TGCAGCATCC GCCTCGACTA CGACAGCAAG AGTCTGCTGG CGCGCAATGT CTGGCTGGGC GCCGGGCAAG TCCGCTGGAC GCCGGTGTAC AGGGACTTCG TGAATGTCTG GCTGGCCACG GTGGTGCTGT TCATACTGTG CATGCCGGGC TTCGTGGCAC TGAACGCGGT GCTGACGGGC GGCATCTTCG ACCTGCTCGC CCGATTGCCT GTGCGCATGC CCCCCCGCAC CGGCCTCACA TGGTTCGTGC TTCTCGACTG GTTCCAGGAA ACCCGCAGCC GCGTGTGGTT CGTGCTCACG ATGGCGCTCT TTGGCCTGAG CAACTTTCTG CTGCTGATGC TGGTATCGAC ACCCGCCCGG GCGTACCGCG AGGCGCGCAT GTTCCAACTG CTGTGGAACG GCATCGGCAT CGGCCAGGCG GCGCACTGCA AATGCCGGCT GTCCAGCATC GGCTTTGTGC TGGCGCGCAT CGGGAACCTG CTGCTGACCC TGCTCACGCT CGGGCTGTAC CGCCCGTTTG CGCGCGTCAG CGAATACCGG ATGAAGCTCG AATCGGTGAC CCTGCATGTT GCCGACGGCG GTGTCGAGCA ACTGACCGGG GCGCCAGCAG CCGGGCCTCG GTGA
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Protein sequence | MYPHPASGAA ESMPSPLPQE IEAHPLAFTG SGGAYFQVWI VNLLLCCVTL GLYIPWARRR TARYFYRHTL VAGSPLEFTG RLRVPVPGLA LVAMLVLGWG IAWSLGLFWK LDICLAYDSA RSGGPCQKIT AGFLAGFLLS IVLLAPLVWG SAMRFRLDAT RWRGLRLQSA ASWRDIYRAS WPLWVLALSW LGLYLARSAT GAMPIGRQVL ALLPAGLMGM FWQGAGLTDT LAKVFKAKIV TSDGLAWLLL GLMLALLCLA RLDYDYRRLR VCKAQSGAGQ GHWRQPEYRD CVNVWLAAVA LFVLSAPMLG MLVGAALNAV LPKDAWVFIL FGVMATMGKF YQLIFKDPTD VVVVGSILFL LLLVLSAPAR AYREARMFQL MWNHIGIGQV ARFKCRLSSV DFVLARFGNL LLTLLTLGLY RPLARVSEYR MKLESVTLYV KGGAGQVAGA PDDARAGDAA GRDSIGHAAP RDPAHDAGLA AGAQASGAPE SAPILVPGPV PGAMPRNGYT HPLAFTGGTG AYFRVWIVNL LLCCVTLGLY TPWARQRTAQ YFYRHTLVAG SPLEFTGRPR GQVLGFVLLL LLWLLLMLAL ASGILWSAWL HQMLRWIPIF DLRIKGDELP WLFRAAEWIP TFGIFASIGH KSMAVPVLAG AALLPWVWGS AMRFRLGATR WRGLRLQFAS HWREIYGGSG LLWVLALLWG GLSWSLYFGF GPQPFSMPEL LADKPAIARF TVMIAWLLGA ALTLLCLCRL DYNRLDLLLR KTRVGAEPVR HKRPVLPNVM ETWLVTVMLC MLGLSLGFVV WKCLPGGYFD KPPFFGVGRS RNGSASVMSV LYRVVIVVLP LLLLSAPARA YREARMFQLV WNGIGVNQAA HFKCRLSSDR FVLLRIQNLL LTLLTLGFYR PLARLSEYRM KLASVTLHVT GDLDQVAGAM LRQQTGLGAV PDFSGRRALR HYLQRAQWLA PLRRLVHKLG PESPIPEGGK LPPLAFIGSA GAYFPVWLVN VLLCCVTLGL YAPWARRRTA RYFYRHTLVA GRPLEFTGRP RPMLLIFVLL LLLAYGAMAS LSTLIYLIYE RGELALYGMA EGATFSAYDI TGTFGQNLAV ASFVLVGAAL APFFWGHAMR FRLGATVWRG LHLQFAAGWR EVYRASRPLR VMALLWTGLF LYMRTLVPGL ADSFLTWRAL VLPALVLTLL CSIRLDYDSK SLLARNVWLG AGQVRWTPVY RDFVNVWLAT VVLFILCMPG FVALNAVLTG GIFDLLARLP VRMPPRTGLT WFVLLDWFQE TRSRVWFVLT MALFGLSNFL LLMLVSTPAR AYREARMFQL LWNGIGIGQA AHCKCRLSSI GFVLARIGNL LLTLLTLGLY RPFARVSEYR MKLESVTLHV ADGGVEQLTG APAAGPR
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