| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1882 |
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| Symbol | |
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| ID | 4690335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2105263 |
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| End bp | 2106201 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639849649 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_996653 |
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| Protein GI | 121608846 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.551347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.560402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTTG GCATAGCCGA CAAGAAAGCG CTGGTCACGG GCGCCGCGCG GGGCATCGGC
AGGGCCGAGG CGCAGGCGCT GGCCGCCGAA GGCGTGGCGC TGGCCATCAA CGACATCGAT
GCGGCGGCGG CGCTGGCCTG CGCCGAGGCG CTGCGCCAGT GCGGCGCCAG GGCCGTGGCC
TGCGCCGGCG ATGTGGCCAC GCCGGAAGGC GCCAGGCAGG TGGTGCAAGC GGCGCTGGAG
CAACTCGGCG GGCTGCATAT CCTGGTGTCG CGTCACCGAT CAGATGTCGT AGGCTGCGCG
CAGCCATCGG AGCGCAGCGC AAGGCGCATC GCGCAGCCAA TACCGAGCGT ATTGGCAAGC
GATGCAACGC CGCGATGCGC TTCGATGGCC AGCGCAGACC GACAGATGAT CGGTGACGCG
ACACCAGTCA ACAATGCCGG GGCTGGTGGC CAGCATCTGG GGCGCAGCGT CCAGGAGATG
CCGATCGAGG ACTGGGACAT CATCGTGCAA ACCCATCTGC GCAGCAGCTT CCTGTGCAGC
AAGTTCGCGC TGCCGGCGTT GCGGGCCAGC GGCTTTGGCC GCATCGTCAA CACCTCGTCG
ATGAACGTCA CTGGCGGCGG CCGGCCCGGC GTGGGCAATT ATTCGGCGGC CAAAGCCGGT
GTCATCGGCT TGACCCGCAC GCTGGCCAAA GAGGTCGGCG CAGCCGGCAT CACCGTCAAT
GCCATCGCGC CGGGCTATGT CGAGACCGCG CTGATTGCCG GATTTTCGCC GGCCAAGCGC
GCCGTCGTGA CCGGGCAAAA TCCGCTGGGC CGGTTCTGCC GGCCTGACGA GGTGGGCGCT
CTGGTGGCCT TTCTGTGCTC GGTGCAGGCC GCCTACATCA ACGGCGCGCT GATCTGCATG
GATGGCGGCA AGCGCGACTT TTTCTGGGCC GACACATGA
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| Protein sequence | MDFGIADKKA LVTGAARGIG RAEAQALAAE GVALAINDID AAAALACAEA LRQCGARAVA
CAGDVATPEG ARQVVQAALE QLGGLHILVS RHRSDVVGCA QPSERSARRI AQPIPSVLAS
DATPRCASMA SADRQMIGDA TPVNNAGAGG QHLGRSVQEM PIEDWDIIVQ THLRSSFLCS
KFALPALRAS GFGRIVNTSS MNVTGGGRPG VGNYSAAKAG VIGLTRTLAK EVGAAGITVN
AIAPGYVETA LIAGFSPAKR AVVTGQNPLG RFCRPDEVGA LVAFLCSVQA AYINGALICM
DGGKRDFFWA DT
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