Gene Veis_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1878 
Symbol 
ID4692348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2101034 
End bp2102149 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content68% 
IMG OID639849645 
ProductABC transporter related 
Protein accessionYP_996649 
Protein GI121608842 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.229415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.103205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA TCCGGCTGGA AAAGGTGCGC AAGACCTACG GCAATGTGGT TGCGGTGCAT 
GGTGTCGACC TGTGCATCGG CGACGGCGAG TTGCTCGTGT TTCTGGGCCC CTCGGGCTGC
GGCAAATCGA CCACGCTGCG CATGATCGCC GGGCTCGAGG AGACCAGCTC CGGCACGATC
CGCATCGGTG AGCGCGATGT CACCACGCTG GAGCCCAAGG ATCGCAACAT CGCGATGGTG
TTCCAGAACT ACGCGCTCTA TCCGCACAAG ACGATCTACG ACAACCTGGC CTTCGGCCTG
CGCATGCGCA AGATGGGGCG CGATCAGATC GACGCGCGGG TGCGCAAGGC GGCGGCCATG
CTGGGCCTGG CGGAACTGCT GGGGCGCCGG CCCAAGCAGC TCTCCGGCGG CCAGATGCAG
CGCGTCGCGC TCGGCCGCGC GCTGGTGCGC GAGCCGGACG TGTTTCTGCT CGACGAGCCG
CTGTCCAACC TCGACGCGAA ACTGCGCGCG CGGATGCGCG AGGAAATCGC GCGCCTGCAC
CAGGAGATCG GCACCAGCAT GGTCTATGTG ACCCACGATC AGGTCGAGGC GATGACGCTG
GCCGACCGCA TCGTGATCAT GCGCGACGGC CATGTGCAGC AGATCGGCGC GCCGCTGGCG
GTCTACGACC GGCCGGCGAA CCTGTTCGTC GCGGGCTTCA TCGGCTCGCC AGAGATGAAT
TTGATCGAGG GGCGGATCGA TGGCGCCCGC TTCGTCGCCG ACCGCTTCGT GCTGCCTGCC
GCACCCGTCG CCGCCCGCTC CGGGGCGGCC GTGGTGCTCG GCATCCGCCC GGAGCATATC
GCGCTGGTGC ATGGCGCGGG CGACCGCGAT CAGGGCGGTG CCGACTTCGA CTTCACCGTG
CGCCTGATCG AGCAACTCGG CGCGCAAACG CTGTGCATTG GCGAGATCGC CGGCCAGCGC
CTGCGCATCC TCGGCGAGCG GGTCGATGGC TGGGCGCCCG GGCACAGCGT CCGCGTCCGG
CTGCAGCCAG CGCGCCTGCA TTGGTTCGAC CCATCCGACG GACAGCGATT GCCCTCGGGC
ACCGGCGCGC ACCGAGCACA GACCACAGGC CCATGA
 
Protein sequence
MAEIRLEKVR KTYGNVVAVH GVDLCIGDGE LLVFLGPSGC GKSTTLRMIA GLEETSSGTI 
RIGERDVTTL EPKDRNIAMV FQNYALYPHK TIYDNLAFGL RMRKMGRDQI DARVRKAAAM
LGLAELLGRR PKQLSGGQMQ RVALGRALVR EPDVFLLDEP LSNLDAKLRA RMREEIARLH
QEIGTSMVYV THDQVEAMTL ADRIVIMRDG HVQQIGAPLA VYDRPANLFV AGFIGSPEMN
LIEGRIDGAR FVADRFVLPA APVAARSGAA VVLGIRPEHI ALVHGAGDRD QGGADFDFTV
RLIEQLGAQT LCIGEIAGQR LRILGERVDG WAPGHSVRVR LQPARLHWFD PSDGQRLPSG
TGAHRAQTTG P