Gene Veis_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1874 
Symbol 
ID4693220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2095750 
End bp2096451 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID639849641 
ProductABC transporter related 
Protein accessionYP_996645 
Protein GI121608838 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.363302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.184488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAC TGGAGCAGAT CCACACCCAC TACGGCGCGG TGCAGGCCCT GTCGGGCGTG 
TCGATCGAAG TCAAACAGGG CGAGATCGTC ACCCTGATCG GCTGCAACGG CGCCGGCAAG
ACGACCCTCA TGATGACGGT CTGCGGCGCG CCCCGCGCAT CGAGCGGCCG CGTGCTGTTC
GAGGGCCGGG ACATCACGAA CCGGCAGACC CACGAGATCA TGCGCATGGG CCTGGCAATC
GCGCCCGAGG GGCGCCGCGT GTTCCCGGGC CTGACGGTGC TGGAGAACCT GAAGATGGGC
GGCTTTTTCG CGCGCCGTGA CGACATCGAG GCGGGCATCG AGCATGTTTT CCAGCTCTTT
CCGCGCCTGC AGCAGCGATC GGCGCAGCGC GCCGGCACGA TGTCGGGCGG CGAGCAGCAG
ATGCTGGCGA TCGGCCGGGC GCTGATGAGC CGCCCGCGCC TGCTGTTGCT CGACGAGCCT
ACGCTGGGCC TGGCGCCGCT GATCATCGCG CAGATCTTCG ACATCATCCG CACGATCCGG
CAACAGGGCG TGACGGTCTT TTTGGTCGAA CAGAACGTGA ACAAGGCGCT GCAGGTGGCG
GACCGGGGCT ACGTGCTGGA GACAGGGCGC GTGGTGCTGG CGGGCACCGG GCAGAGCCTG
CTGGCGAACG ACAGCGTAAG GAAAGCCTAC CTGGGGGGAT AG
 
Protein sequence
MLELEQIHTH YGAVQALSGV SIEVKQGEIV TLIGCNGAGK TTLMMTVCGA PRASSGRVLF 
EGRDITNRQT HEIMRMGLAI APEGRRVFPG LTVLENLKMG GFFARRDDIE AGIEHVFQLF
PRLQQRSAQR AGTMSGGEQQ MLAIGRALMS RPRLLLLDEP TLGLAPLIIA QIFDIIRTIR
QQGVTVFLVE QNVNKALQVA DRGYVLETGR VVLAGTGQSL LANDSVRKAY LGG