Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1874 |
Symbol | |
ID | 4693220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2095750 |
End bp | 2096451 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639849641 |
Product | ABC transporter related |
Protein accession | YP_996645 |
Protein GI | 121608838 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.363302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.184488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAC TGGAGCAGAT CCACACCCAC TACGGCGCGG TGCAGGCCCT GTCGGGCGTG TCGATCGAAG TCAAACAGGG CGAGATCGTC ACCCTGATCG GCTGCAACGG CGCCGGCAAG ACGACCCTCA TGATGACGGT CTGCGGCGCG CCCCGCGCAT CGAGCGGCCG CGTGCTGTTC GAGGGCCGGG ACATCACGAA CCGGCAGACC CACGAGATCA TGCGCATGGG CCTGGCAATC GCGCCCGAGG GGCGCCGCGT GTTCCCGGGC CTGACGGTGC TGGAGAACCT GAAGATGGGC GGCTTTTTCG CGCGCCGTGA CGACATCGAG GCGGGCATCG AGCATGTTTT CCAGCTCTTT CCGCGCCTGC AGCAGCGATC GGCGCAGCGC GCCGGCACGA TGTCGGGCGG CGAGCAGCAG ATGCTGGCGA TCGGCCGGGC GCTGATGAGC CGCCCGCGCC TGCTGTTGCT CGACGAGCCT ACGCTGGGCC TGGCGCCGCT GATCATCGCG CAGATCTTCG ACATCATCCG CACGATCCGG CAACAGGGCG TGACGGTCTT TTTGGTCGAA CAGAACGTGA ACAAGGCGCT GCAGGTGGCG GACCGGGGCT ACGTGCTGGA GACAGGGCGC GTGGTGCTGG CGGGCACCGG GCAGAGCCTG CTGGCGAACG ACAGCGTAAG GAAAGCCTAC CTGGGGGGAT AG
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Protein sequence | MLELEQIHTH YGAVQALSGV SIEVKQGEIV TLIGCNGAGK TTLMMTVCGA PRASSGRVLF EGRDITNRQT HEIMRMGLAI APEGRRVFPG LTVLENLKMG GFFARRDDIE AGIEHVFQLF PRLQQRSAQR AGTMSGGEQQ MLAIGRALMS RPRLLLLDEP TLGLAPLIIA QIFDIIRTIR QQGVTVFLVE QNVNKALQVA DRGYVLETGR VVLAGTGQSL LANDSVRKAY LGG
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