Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1871 |
Symbol | |
ID | 4690811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2092744 |
End bp | 2093670 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639849638 |
Product | inner-membrane translocator |
Protein accession | YP_996642 |
Protein GI | 121608835 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.384431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0224958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGATT TTCTTGCCCA GTTCACCCAG CAGTTGGTCA ACGGCCTGAC GCTGGGCGCG ATCTATGCGC TGATCGCCAT CGGCTACACG ATGGTCTACG GGATCATCGG CATGATCAAC TTCGCCCACG GCGAGATTTA CATGATCGGC GCCTATGTCG GCCTGGTGAC GCTGACCGCC ATTGGCACGC AGGGCGGCTA TCCGCTGCCG CTGGTTCTCG GCGCGGCTTT GTTCGTCTCG GTGCTGGTCA CGGGGACATA TGGCTTCGTG GTCGAGCGCG TGGCCTACCG CCCGTTGCGG GGCGGGCCGC GGCTGGTGCC GCTGATCTCC GCGATCGGCA TGTCCATCTT CTTGCAGAAC TACATGCAGA TCGGCCAGGG CGCGCGCGAT GTCTCCGTTC CGCTCCTCGT TTCCGGGGCG CTGGAGTTCG ACATGGGCGG CGACTTCACG GTCACCGTGC CCTATGGGCG TTTGTTGATC GTGGGCGTGA CGCTGGCGCT GATGATCGCG CTGACGCTGT TCATCGCGCA TTCGCGCATG GGGCGCGCCT GCCGCGCCTG CGCCGAGGAC ATGCAGATGG CCAATCTGCT GGGCATCGAC ACCAACAAGG TGATCTCCTT CACCTTCGTG CTCGGCGCCA TGCTGGCTGC CGTCGGCGGG GTGCTGATCG GGTTGAGCAT CGGCAAGCTC AACCCTTTCA TCGGCTTCAT CGCCGGCATC AAGGCTTTCA CGGCGGCGGT GCTCGGCGGT ATCGGCAGCA TCCCCGGGGC CATGCTGGGC GGGGTGTTGC TGGGGCTGGC CGAGACCTTC GCCTCCGGCT ACATGCCCGG CGAATACAAG GACGTGGTGG CTTTCGGCCT GCTGATTCTG GTGCTGCTGC TGCGCCCCAC CGGTCTGCTG GGCAGGCCGG ATGTGCAGAA GGTGTGA
|
Protein sequence | MNDFLAQFTQ QLVNGLTLGA IYALIAIGYT MVYGIIGMIN FAHGEIYMIG AYVGLVTLTA IGTQGGYPLP LVLGAALFVS VLVTGTYGFV VERVAYRPLR GGPRLVPLIS AIGMSIFLQN YMQIGQGARD VSVPLLVSGA LEFDMGGDFT VTVPYGRLLI VGVTLALMIA LTLFIAHSRM GRACRACAED MQMANLLGID TNKVISFTFV LGAMLAAVGG VLIGLSIGKL NPFIGFIAGI KAFTAAVLGG IGSIPGAMLG GVLLGLAETF ASGYMPGEYK DVVAFGLLIL VLLLRPTGLL GRPDVQKV
|
| |