| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1866 |
|---|
| Symbol | |
|---|
| ID | 4693649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2086184 |
|---|
| End bp | 2087119 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639849633 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_996637 |
|---|
| Protein GI | 121608830 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.153142 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0602666 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACC TGATTGGCCG CCTGCTCGCG GCGCTCCCGG TGATGGCGGT GGTGGCCGTG
GTGGTGTTCC TGCTGATCCA TCTGTCGCCA GGCGATCCGG CTGCGCTGAT CGCCGGCGAC
CTGGCCACCG GCGAGGACAT CGAAAAACTG CGCGTGGCAC TCGGGCTGGA CCTGCCGCTG
TGGCAGCAGT TCATGGTCTG GTTTGGCAAA CTCGTCACCG GCGATTTGGG CGTTTCGATC
TTCTCGCAGG TGCCGGTCAC GCAATTGCTG GCGCAGCGGC TGGAGCCGAC GCTGTCGATC
GCCGCGCTGA CGATGGCGCT CACGCTGCTG GTCGCGCTGC CGCTGGGCAC GCTCGCGGCG
CATCGCGCCG GCAGTTGGAT CGACCGGCTG GTGATGCTGT TTGCGGTGCT GGCCTTTTCG
GTGCCGGTGT TTCTCGTCGG CTATCTGCTG GTGTATGGCT TTGCCATCCG GCTGCCATGG
TTTCCGGTGC AGGGCTATGC GCGGCTGGCC GACGGCGCCG GGCCATGGCT GCGTTCGCTG
GTCCTGCCCT GTGTCACGCT GGCGCTGGTG TACATCGCCT TGGTGACGCG CATGACGCGC
GCCACCGTGC TCGAAGCGCT GCACGAAGAC TACATCCGCA CCGCGCGGGC CAAGGGCCTG
GGCGTGCTGC CGGTGCTGCT CCAGGCGCTG CACAACGCCG CCGTTCCGAT TGCCACCACC
GTGGGCATGG GCATCGCGCT GCTGATCGGC GGCGTGGTGG TGACCGAGAC CGTGTTCGCC
ATCGCCGGTG TCGGCCGGCT GGTGGTCGAT TCCGTGCAGC GCCACGACTA CCCCGTGATC
CAGAGCGTGC TGCTGATCTC CGCTGGCGTT TATGTGTTGA TCAACCTGCT GATCGACTTG
AGCTACCGCT TCCTCGACCC GCGCATCCAG TATTAG
|
|---|
| Protein sequence | MSYLIGRLLA ALPVMAVVAV VVFLLIHLSP GDPAALIAGD LATGEDIEKL RVALGLDLPL
WQQFMVWFGK LVTGDLGVSI FSQVPVTQLL AQRLEPTLSI AALTMALTLL VALPLGTLAA
HRAGSWIDRL VMLFAVLAFS VPVFLVGYLL VYGFAIRLPW FPVQGYARLA DGAGPWLRSL
VLPCVTLALV YIALVTRMTR ATVLEALHED YIRTARAKGL GVLPVLLQAL HNAAVPIATT
VGMGIALLIG GVVVTETVFA IAGVGRLVVD SVQRHDYPVI QSVLLISAGV YVLINLLIDL
SYRFLDPRIQ Y
|
|---|
| |