Gene Veis_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1864 
Symbol 
ID4693058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2084209 
End bp2085261 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content70% 
IMG OID639849631 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_996635 
Protein GI121608828 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.429685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.131227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG CTATGCCCGA GGCGGCGCTG CCTGCCGGCG CACCGCTGCT CGAAGTCGAT 
GGCCTGTGCA CCTGGTTCGA CACGCTGGCC GGCACGGTGC GCCCGGTCGA TGGGGTCTCG
TTCATCGTGC GCGCCGGTCT CACGCTCGGT GTGGTCGGCG AATCGGGCTG CGGCAAAAGC
GTGACCGCGC TGTCCATCCT GCGCTTGCTG CCGACCCCGC CTGCGCGCCA CATGGGCGCG
GTGCGGCTGC GCGGCACCGA CCTGATGCGC CTGAGCGAGC GCCAGATGCG GCAGATTCGC
GGCAACCGCA TCTCGATGAT CTTTCAGGAG CCGATGAGCT CGCTGAACCC GGTGCTCACC
GTGGGCCGGC AGATTGCCGA GACCGTGCGA CTGCACCAGC GCGCCAGCCG CGCCGATGCC
ATGCAGCGCG CGGTCGAAAT GCTGCGCCTG GTGCAAATCC CCGAGCCGGA GCGGCGCGTG
GCCGAGTACC CGCACCAACT GTCGGGCGGC ATGCGCCAGC GCGTGATGAT CGCACTGGCG
CTGGCCTGCA ACCCCGAATT GCTGATCGCC GACGAGCCCA CGACGGCGCT CGATGTCACC
ATCCAGGCGC AGATTCTCGA CCTCATCGGG CGCTTGCAGG CGCAGTTGGG CATGGGCGTG
GTGCTGATCA CGCATGACCT GGGCGTGGTG GCCGAAAACT GCGACCGCGT GCTCGTGATG
TATGCCGGGC GCAAGGTCGA GGAGGCCGAC GTGACCGATC TCTTCGACCG GCCGCTGCAC
CCCTACACGC GCGCGCTGAT GGCCTCGATG CCGGCGCTGA ACCAGACCAG CGCGCGCCTG
GCCGAAATCC CGGGGCTGGT GCCGGCGGCG CACGAGCTCG GCCGCGGCTG CGCCTTTGCC
GCGCGTTGCA GCGCCGCGCG CGCACGCTGC CACAGCGAAA CGCCGCAGCT CATGCGCCAA
GGCGGCGACC ATCTGGTGGC CTGCTTTGCC GTCGAGCAGC AGTGGCAGCC GTGGGTCGAC
CACCCGGACG CCACGCTCGG GTTGCCCGCA TGA
 
Protein sequence
MTTAMPEAAL PAGAPLLEVD GLCTWFDTLA GTVRPVDGVS FIVRAGLTLG VVGESGCGKS 
VTALSILRLL PTPPARHMGA VRLRGTDLMR LSERQMRQIR GNRISMIFQE PMSSLNPVLT
VGRQIAETVR LHQRASRADA MQRAVEMLRL VQIPEPERRV AEYPHQLSGG MRQRVMIALA
LACNPELLIA DEPTTALDVT IQAQILDLIG RLQAQLGMGV VLITHDLGVV AENCDRVLVM
YAGRKVEEAD VTDLFDRPLH PYTRALMASM PALNQTSARL AEIPGLVPAA HELGRGCAFA
ARCSAARARC HSETPQLMRQ GGDHLVACFA VEQQWQPWVD HPDATLGLPA