Gene Veis_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1856 
Symbol 
ID4691195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2077486 
End bp2078313 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content58% 
IMG OID639849623 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_996627 
Protein GI121608820 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.519725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.376905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAC CACTTGACGA AACAAATCGC AGCACCTATG AGCTTGGGCT GGAATGCCTG 
TGCACTGTCG AGGCAACAGG CAATCCTGCG ATCATTGCTG CCATGGCGGA CATTTGCCCC
GATCTTGGGA GATTGGCCAT CAGTTTCGTG TATGGCGAAA TCTACCAGCG GCCGCACCTG
AGCTACCGCG ACAGGCAATT GGTTACCGTG GCTGCTCTGG CCGCGCTGGG CAATGCGCGG
CCACAATTGA AATTCCACAT CGCCGCTGCG CTCAATGTGG GATGCACCGG CGCTGAAATC
ATCGAATCGA TGATACAACT CGTGCTCTAC GCGGGCTTTC CCGCCGCCTT GAACGGTGTC
TTTGCGGCCA AGGAAGTGTT TGACGAACGC AAGCTGAATT TCATTCCCGA GACCACCATG
TCTTGCGCTC CCGATGCCAG ATTCCAGAAA GGCATGGAGG CACTTTCGCG CATCGATGGC
CATGCCGGGG AAGCGGTGAT TTCCGCGCTG AAAGGAATAG CCCCGGACCT GGGCCGTTTC
ATCGTCGAGT TTGGTTTTGG CGAAATTTAC AAGCGCCCCG CGCTGGGGCT GCTGGAGCGC
GAGATGATTA CCGTCGCGGC GCTTGCTGCG CTGGGCACCG CCACGCCCCA ACTCAAGGTG
CATATTCATG GCCTTCTGAA TGTGGGCGGT ACGCGTGAAC AGATGGTCGA ATTGGCCATT
CATATCGCGG CCTATGCAGG TTTTCCGGCC GCCATCAACG CTGCCCTTCT GGCGAAAGAA
GTATTTGCCG AGCGAGATGT CGATGGCGGC GCGACATGCG CGGTATGA
 
Protein sequence
MNQPLDETNR STYELGLECL CTVEATGNPA IIAAMADICP DLGRLAISFV YGEIYQRPHL 
SYRDRQLVTV AALAALGNAR PQLKFHIAAA LNVGCTGAEI IESMIQLVLY AGFPAALNGV
FAAKEVFDER KLNFIPETTM SCAPDARFQK GMEALSRIDG HAGEAVISAL KGIAPDLGRF
IVEFGFGEIY KRPALGLLER EMITVAALAA LGTATPQLKV HIHGLLNVGG TREQMVELAI
HIAAYAGFPA AINAALLAKE VFAERDVDGG ATCAV