Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1829 |
Symbol | |
ID | 4693723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2041920 |
End bp | 2043782 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639849595 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_996600 |
Protein GI | 121608793 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.732346 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAT TTCAAAAGGG ACATCCGTCT CAAAAGGGGC GTCTGTCCGG CAACGCCAAT GCGGCGTCGC CGCGCTTGGC CACGGTGGCA TGTGCCCTCC GGCTGATGCT GGCGGGCGGC ATGCTCGCCG GACTGTCGCA GACGGCGCTG GCCAACGACG AGTTGATACG GCTGGCGCAA GACCACAAGC AATGGGCCCA GCAGGGCAAG GACTACGACC ATAGTCACTA CAGCGGCCTG ACCCAGATCA ACCGCAAGAA CGTCAAGGAT TTGAAGGCCG CCTGGACCTT TTCCACCGGC GTGCTGCATG GCCATGAAGG CGGGCCCCTG GTGGTCGGCG GCATCATGTA CGTGCACACG CCCTTCCCGA ACATCACCTA CGCGATCGAC CTGAACGACC CGAACAAGAT TCTCTGGGAA CACAAGCCAA AGCAGGATGC GTCGGTGCGC GCCGTGGCCT GCTGCGATGT GGTCAACCGC GGTCTGGCCT ATGGTGACGG CAAGATTTTC AAGACCCAAC TCGATGGCCG CGTCGTGGCA TTGGACGCCA AGACGGGCAA GGTCATCTGG GAGATGGAAA ACTCCGATCC GAGCGTCGGC TCCACGCTGA CGCAGGCGCC ACTGGTGGTG GAAGACTTGG TGATCATCGG CTCCTCCGGT GCCGAACTGG GCGTGCGCGG GTACGTCACC GCCTACAGGA TGAAGGATGG CGAGCAGGTC TGGCGCGCCT ATGCCACCGG CCCCGACAGC GACTTGCTGC TGGCGGACAA CTTCAACGCC ACCAACCCGC ACTATGGCCA AAAGGGCCTG GGCACCAGCA CCTGGGAAGG CGATGCGTGG AAGATCGGCG GCGGCACCAA CTGGGGCTGG TACGCCTACG ACCCGTCGCT CAAGCAGCTT TTCTACGGAT CGGGCAACCC CGCGCCGTGG AACGAGACCA TGCGCCCCGG CGACAACAAG TGGACCATGT CGATCTGGAG CCGCGACGTA AAGACCGGCA AAGCCAAGTT CGCCTTCCAA AAGACGCCGC ACGATGAATG GGACTATGCC GGCGTGAACT GGATCGGCCT GTCCGAGCAG GTGGTGGACG GCAAGAAGCA AAAATTGCTG ACCCACCCCG ACCGCAACGG CATCGTCTAC ACGCTGAACC GCGAGAGCGG CAACCTCGTG CGGGCCGACA AGATCGACCC CACGGTCAAT GTCTTCAAGG GCTACGACAT GAAGAAGGGG GTGCCGATCC GCGACCCCGA GTACAGCACC CGCATGGACC ACCAGGCCAA GGGCATCTGC CCCTCGGCGA TGGGCTACCA CAACCAGGGC CACGACTCCT ACGACAAGAA GCGTGAGCTG ATGATGTTCG GCACGAACAT GATCTGCATG GACTGGGAGC CGTTCATGCT GCCTTACCGG GCGGGCCAGT TCTTCGTCGG CGCCACGCTG AACATGTATG CCACACCGGG CAACAACGGC AATATGGGCC AGGTCAAGGC CTACGATGTC AAAACGTCGA AGTTCAAGTG GACCAAGGAT GAGAAGTTCG CGGTCTGGGG TGGCACCACC ACCACTGCCG GCGACTTGGT CTTCTACGGC ACGCTCGACG GGTTCATCAA GGCCCGCGAC GCCGACACCG GCGATCTTCT GTGGCAGTTC AAGCTGCCGT CGGGCGTGAT CGGCCACCCG GTCACCTACG AGCACCGGGG CAAGCAGTAT GTCGCCATCT ACTACGGCGT CGGTGGCTGG CCGGGTGTGG GCTTGGTGTT CGACCTGACC GACCCGACGG CCGGCCTGGG CGCGGTGGGA GCCTTCAAGG AACTGCAAAA GTACACCAAG ATGGGTGGCG GCATGATGGT CTTCTCGCTG TAA
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Protein sequence | MKAFQKGHPS QKGRLSGNAN AASPRLATVA CALRLMLAGG MLAGLSQTAL ANDELIRLAQ DHKQWAQQGK DYDHSHYSGL TQINRKNVKD LKAAWTFSTG VLHGHEGGPL VVGGIMYVHT PFPNITYAID LNDPNKILWE HKPKQDASVR AVACCDVVNR GLAYGDGKIF KTQLDGRVVA LDAKTGKVIW EMENSDPSVG STLTQAPLVV EDLVIIGSSG AELGVRGYVT AYRMKDGEQV WRAYATGPDS DLLLADNFNA TNPHYGQKGL GTSTWEGDAW KIGGGTNWGW YAYDPSLKQL FYGSGNPAPW NETMRPGDNK WTMSIWSRDV KTGKAKFAFQ KTPHDEWDYA GVNWIGLSEQ VVDGKKQKLL THPDRNGIVY TLNRESGNLV RADKIDPTVN VFKGYDMKKG VPIRDPEYST RMDHQAKGIC PSAMGYHNQG HDSYDKKREL MMFGTNMICM DWEPFMLPYR AGQFFVGATL NMYATPGNNG NMGQVKAYDV KTSKFKWTKD EKFAVWGGTT TTAGDLVFYG TLDGFIKARD ADTGDLLWQF KLPSGVIGHP VTYEHRGKQY VAIYYGVGGW PGVGLVFDLT DPTAGLGAVG AFKELQKYTK MGGGMMVFSL
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