Gene Veis_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1829 
Symbol 
ID4693723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2041920 
End bp2043782 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content62% 
IMG OID639849595 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_996600 
Protein GI121608793 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4993] Glucose dehydrogenase 
TIGRFAM ID[TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.732346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TTCAAAAGGG ACATCCGTCT CAAAAGGGGC GTCTGTCCGG CAACGCCAAT 
GCGGCGTCGC CGCGCTTGGC CACGGTGGCA TGTGCCCTCC GGCTGATGCT GGCGGGCGGC
ATGCTCGCCG GACTGTCGCA GACGGCGCTG GCCAACGACG AGTTGATACG GCTGGCGCAA
GACCACAAGC AATGGGCCCA GCAGGGCAAG GACTACGACC ATAGTCACTA CAGCGGCCTG
ACCCAGATCA ACCGCAAGAA CGTCAAGGAT TTGAAGGCCG CCTGGACCTT TTCCACCGGC
GTGCTGCATG GCCATGAAGG CGGGCCCCTG GTGGTCGGCG GCATCATGTA CGTGCACACG
CCCTTCCCGA ACATCACCTA CGCGATCGAC CTGAACGACC CGAACAAGAT TCTCTGGGAA
CACAAGCCAA AGCAGGATGC GTCGGTGCGC GCCGTGGCCT GCTGCGATGT GGTCAACCGC
GGTCTGGCCT ATGGTGACGG CAAGATTTTC AAGACCCAAC TCGATGGCCG CGTCGTGGCA
TTGGACGCCA AGACGGGCAA GGTCATCTGG GAGATGGAAA ACTCCGATCC GAGCGTCGGC
TCCACGCTGA CGCAGGCGCC ACTGGTGGTG GAAGACTTGG TGATCATCGG CTCCTCCGGT
GCCGAACTGG GCGTGCGCGG GTACGTCACC GCCTACAGGA TGAAGGATGG CGAGCAGGTC
TGGCGCGCCT ATGCCACCGG CCCCGACAGC GACTTGCTGC TGGCGGACAA CTTCAACGCC
ACCAACCCGC ACTATGGCCA AAAGGGCCTG GGCACCAGCA CCTGGGAAGG CGATGCGTGG
AAGATCGGCG GCGGCACCAA CTGGGGCTGG TACGCCTACG ACCCGTCGCT CAAGCAGCTT
TTCTACGGAT CGGGCAACCC CGCGCCGTGG AACGAGACCA TGCGCCCCGG CGACAACAAG
TGGACCATGT CGATCTGGAG CCGCGACGTA AAGACCGGCA AAGCCAAGTT CGCCTTCCAA
AAGACGCCGC ACGATGAATG GGACTATGCC GGCGTGAACT GGATCGGCCT GTCCGAGCAG
GTGGTGGACG GCAAGAAGCA AAAATTGCTG ACCCACCCCG ACCGCAACGG CATCGTCTAC
ACGCTGAACC GCGAGAGCGG CAACCTCGTG CGGGCCGACA AGATCGACCC CACGGTCAAT
GTCTTCAAGG GCTACGACAT GAAGAAGGGG GTGCCGATCC GCGACCCCGA GTACAGCACC
CGCATGGACC ACCAGGCCAA GGGCATCTGC CCCTCGGCGA TGGGCTACCA CAACCAGGGC
CACGACTCCT ACGACAAGAA GCGTGAGCTG ATGATGTTCG GCACGAACAT GATCTGCATG
GACTGGGAGC CGTTCATGCT GCCTTACCGG GCGGGCCAGT TCTTCGTCGG CGCCACGCTG
AACATGTATG CCACACCGGG CAACAACGGC AATATGGGCC AGGTCAAGGC CTACGATGTC
AAAACGTCGA AGTTCAAGTG GACCAAGGAT GAGAAGTTCG CGGTCTGGGG TGGCACCACC
ACCACTGCCG GCGACTTGGT CTTCTACGGC ACGCTCGACG GGTTCATCAA GGCCCGCGAC
GCCGACACCG GCGATCTTCT GTGGCAGTTC AAGCTGCCGT CGGGCGTGAT CGGCCACCCG
GTCACCTACG AGCACCGGGG CAAGCAGTAT GTCGCCATCT ACTACGGCGT CGGTGGCTGG
CCGGGTGTGG GCTTGGTGTT CGACCTGACC GACCCGACGG CCGGCCTGGG CGCGGTGGGA
GCCTTCAAGG AACTGCAAAA GTACACCAAG ATGGGTGGCG GCATGATGGT CTTCTCGCTG
TAA
 
Protein sequence
MKAFQKGHPS QKGRLSGNAN AASPRLATVA CALRLMLAGG MLAGLSQTAL ANDELIRLAQ 
DHKQWAQQGK DYDHSHYSGL TQINRKNVKD LKAAWTFSTG VLHGHEGGPL VVGGIMYVHT
PFPNITYAID LNDPNKILWE HKPKQDASVR AVACCDVVNR GLAYGDGKIF KTQLDGRVVA
LDAKTGKVIW EMENSDPSVG STLTQAPLVV EDLVIIGSSG AELGVRGYVT AYRMKDGEQV
WRAYATGPDS DLLLADNFNA TNPHYGQKGL GTSTWEGDAW KIGGGTNWGW YAYDPSLKQL
FYGSGNPAPW NETMRPGDNK WTMSIWSRDV KTGKAKFAFQ KTPHDEWDYA GVNWIGLSEQ
VVDGKKQKLL THPDRNGIVY TLNRESGNLV RADKIDPTVN VFKGYDMKKG VPIRDPEYST
RMDHQAKGIC PSAMGYHNQG HDSYDKKREL MMFGTNMICM DWEPFMLPYR AGQFFVGATL
NMYATPGNNG NMGQVKAYDV KTSKFKWTKD EKFAVWGGTT TTAGDLVFYG TLDGFIKARD
ADTGDLLWQF KLPSGVIGHP VTYEHRGKQY VAIYYGVGGW PGVGLVFDLT DPTAGLGAVG
AFKELQKYTK MGGGMMVFSL