Gene Veis_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1807 
Symbol 
ID4690381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2015538 
End bp2015972 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content56% 
IMG OID639849573 
Productalkylhydroperoxidase 
Protein accessionYP_996578 
Protein GI121608771 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.940571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA GTTTGCGCCT TCCGTACTAC GAACTTTCAC CACAGCTATT GCAAGGGTTG 
CGTCAAATCA AGGTCGATCT GGAGGCCAGT CCCCTGGGTC TGCCATTGAT CGAACTTGTC
TATCTGCGCG TCGCGCAGAT CAACGGTTGT TCGTATTGCC TGAATATGCA CACCAAAACC
TTGCGTGAGC GCAATGAGAC GGATCGTCGT CTGGCCGAAC TGGCCGGCTG GCGCGTCAGT
TCCCAGTTCA GCCAGCGCGA GAAGTCGGCA TTGGAGTGGG CCGAATCGCT GACCCATGTG
GCCGATACCC ATGCCCCGGA CGAAGCCTTC TTCCCGCTGA AGGAGCATTT CAGCGATCAG
GAAATTTCCG ATCTGACCTT CGCCATCGCG CTGATGAATG CAATGACCCG CCTTGCCATT
GGCATGCGCC AGTAA
 
Protein sequence
MKSSLRLPYY ELSPQLLQGL RQIKVDLEAS PLGLPLIELV YLRVAQINGC SYCLNMHTKT 
LRERNETDRR LAELAGWRVS SQFSQREKSA LEWAESLTHV ADTHAPDEAF FPLKEHFSDQ
EISDLTFAIA LMNAMTRLAI GMRQ