Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1798 |
Symbol | |
ID | 4694772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2007975 |
End bp | 2009210 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639849564 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_996570 |
Protein GI | 121608763 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGTG CCCTCAAGTT TGCAGCGGCC TCGGTCATCC TGGCGGGCGC CTGCGGGGCC TCTGCGCAAA AAGGCGAGAC GGTGAAAGTG GCCTGGATCG ACCCGCTGTC GGGCCTGATG GCGTCGGTCG GAACGAACCA GCTCAAGAGC TTTCAGTTCG TTGCCGAAGA GTTCTTCAAC AAGAAGAATG CCGCTGGCGT CAAATTTGAA ATCATCGCCA TCGACAACAA GCTCAGCCCG CAAGAGACCA CCAGCGCTTT GCGCTCGGTC ATCGACCAGG GGGTGCGCTA TGTGATACAG GGCAACGGCT CCGGTCCGGC CTTGGCCATC ATCGACGCGC TGGAAAAGCA CAACGCGCGC AATCCCGGCA AGGAAGTCCT GTACCTGAAC CACGCGGCCG TGGACCCGGA TCTGACCAAC AGCCGGTGCA GTTACTGGCA TTTCCGTCTG GATGCCGACA CCTCGATGAA GATGGAGGCG CTGACCACGT ACATGAAGGA CATGCCCGGA ATCAAGAAGA TCTACCTGAT CAACCAGAAC TACTCGCATG GCCACCAAGT CTCGAAGTTC GCCAAGGAGA TGATGCGGCG CAAGCGCCCG GACGTGCAAT TCGTCGGCGA CGACCTGCAC CCGCTGGCGC AGGTACGCGA CTTTGCGCCC TATATCGCGA AGATCAAGCA GTCCGGCGCC GACACCGTGA TCACCGGCAA CTGGGGCCCG GACCTGGCGC TGCTGATCAA GGCGGCCAAC GATGCCGGCT TGAACCATGT CGCCTTCTAC ACCTACTACG CCTCCGTCAT CGGCGGACCC ACGGCGATCG GCGCCGCCGC TGCGGGACGG GTGTACATGG TGGCGTATGC CCACCCCAAT CTGCCGGGCG AGATCAACAA GATCGTTGTC GACTTCGAAA AGAAGTTCGG CGAAGACATG TTCACGCCCT CGGTCTACCA CGCCTACTCG CTGCTCGCCG CAGGCTTTGC CAAAGCCCGC TCGACCGACC CCGTGAAGGT GGCCGCAGCG CTCGAAGGTC TGAAATTCAA CAGCTTCAAC GGTGAGGTCG AGATGCGCAA GACCGACCAC CAACTCCAGC AAGGGCTGTT CATCTCGAAG TGGGACAAGG CCGGCGGCAA GTTCCCTATC GATGCTGAAA AAACCGGCTA CACCTTCATC CCGGTGCAGT ACTTCGAGCC CTATGTGGCC AGCACGCCCA CCTCGTGCCA AATGAAGCGG CCGTGA
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Protein sequence | MKCALKFAAA SVILAGACGA SAQKGETVKV AWIDPLSGLM ASVGTNQLKS FQFVAEEFFN KKNAAGVKFE IIAIDNKLSP QETTSALRSV IDQGVRYVIQ GNGSGPALAI IDALEKHNAR NPGKEVLYLN HAAVDPDLTN SRCSYWHFRL DADTSMKMEA LTTYMKDMPG IKKIYLINQN YSHGHQVSKF AKEMMRRKRP DVQFVGDDLH PLAQVRDFAP YIAKIKQSGA DTVITGNWGP DLALLIKAAN DAGLNHVAFY TYYASVIGGP TAIGAAAAGR VYMVAYAHPN LPGEINKIVV DFEKKFGEDM FTPSVYHAYS LLAAGFAKAR STDPVKVAAA LEGLKFNSFN GEVEMRKTDH QLQQGLFISK WDKAGGKFPI DAEKTGYTFI PVQYFEPYVA STPTSCQMKR P
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