Gene Veis_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1798 
Symbol 
ID4694772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2007975 
End bp2009210 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content61% 
IMG OID639849564 
Productextracellular ligand-binding receptor 
Protein accessionYP_996570 
Protein GI121608763 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGTG CCCTCAAGTT TGCAGCGGCC TCGGTCATCC TGGCGGGCGC CTGCGGGGCC 
TCTGCGCAAA AAGGCGAGAC GGTGAAAGTG GCCTGGATCG ACCCGCTGTC GGGCCTGATG
GCGTCGGTCG GAACGAACCA GCTCAAGAGC TTTCAGTTCG TTGCCGAAGA GTTCTTCAAC
AAGAAGAATG CCGCTGGCGT CAAATTTGAA ATCATCGCCA TCGACAACAA GCTCAGCCCG
CAAGAGACCA CCAGCGCTTT GCGCTCGGTC ATCGACCAGG GGGTGCGCTA TGTGATACAG
GGCAACGGCT CCGGTCCGGC CTTGGCCATC ATCGACGCGC TGGAAAAGCA CAACGCGCGC
AATCCCGGCA AGGAAGTCCT GTACCTGAAC CACGCGGCCG TGGACCCGGA TCTGACCAAC
AGCCGGTGCA GTTACTGGCA TTTCCGTCTG GATGCCGACA CCTCGATGAA GATGGAGGCG
CTGACCACGT ACATGAAGGA CATGCCCGGA ATCAAGAAGA TCTACCTGAT CAACCAGAAC
TACTCGCATG GCCACCAAGT CTCGAAGTTC GCCAAGGAGA TGATGCGGCG CAAGCGCCCG
GACGTGCAAT TCGTCGGCGA CGACCTGCAC CCGCTGGCGC AGGTACGCGA CTTTGCGCCC
TATATCGCGA AGATCAAGCA GTCCGGCGCC GACACCGTGA TCACCGGCAA CTGGGGCCCG
GACCTGGCGC TGCTGATCAA GGCGGCCAAC GATGCCGGCT TGAACCATGT CGCCTTCTAC
ACCTACTACG CCTCCGTCAT CGGCGGACCC ACGGCGATCG GCGCCGCCGC TGCGGGACGG
GTGTACATGG TGGCGTATGC CCACCCCAAT CTGCCGGGCG AGATCAACAA GATCGTTGTC
GACTTCGAAA AGAAGTTCGG CGAAGACATG TTCACGCCCT CGGTCTACCA CGCCTACTCG
CTGCTCGCCG CAGGCTTTGC CAAAGCCCGC TCGACCGACC CCGTGAAGGT GGCCGCAGCG
CTCGAAGGTC TGAAATTCAA CAGCTTCAAC GGTGAGGTCG AGATGCGCAA GACCGACCAC
CAACTCCAGC AAGGGCTGTT CATCTCGAAG TGGGACAAGG CCGGCGGCAA GTTCCCTATC
GATGCTGAAA AAACCGGCTA CACCTTCATC CCGGTGCAGT ACTTCGAGCC CTATGTGGCC
AGCACGCCCA CCTCGTGCCA AATGAAGCGG CCGTGA
 
Protein sequence
MKCALKFAAA SVILAGACGA SAQKGETVKV AWIDPLSGLM ASVGTNQLKS FQFVAEEFFN 
KKNAAGVKFE IIAIDNKLSP QETTSALRSV IDQGVRYVIQ GNGSGPALAI IDALEKHNAR
NPGKEVLYLN HAAVDPDLTN SRCSYWHFRL DADTSMKMEA LTTYMKDMPG IKKIYLINQN
YSHGHQVSKF AKEMMRRKRP DVQFVGDDLH PLAQVRDFAP YIAKIKQSGA DTVITGNWGP
DLALLIKAAN DAGLNHVAFY TYYASVIGGP TAIGAAAAGR VYMVAYAHPN LPGEINKIVV
DFEKKFGEDM FTPSVYHAYS LLAAGFAKAR STDPVKVAAA LEGLKFNSFN GEVEMRKTDH
QLQQGLFISK WDKAGGKFPI DAEKTGYTFI PVQYFEPYVA STPTSCQMKR P