Gene Veis_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1788 
Symbol 
ID4690913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1995579 
End bp1996460 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content65% 
IMG OID639849554 
Producthypothetical protein 
Protein accessionYP_996560 
Protein GI121608753 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.192563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGTT ATCGCCACGC CTTCCACGCA GGCAACCATG CCGATGTGTT CAAGCACACG 
GTGTTGATCG CCACCCTGCA ATACCTCACC GACAAGGATG CGGCGCTGAC CGTGCTCGAC
AGCCATGCCG GCGCGGGCCT GTACCGGCTT GACGGGGACT ATGCCCGCAC CAGTGGCGAG
GCCGCAGACG GCGTGGTGCG CCTGTTTGCT GCGCCGGGCA GCGCGCTGGC CCCGGCCCTG
CAAGCCTATG TGGACATGGT CGGCGCCTTC AACCAGGGCC GCCGGTTGCG GGTCTATCCC
GGCTCGCCCT GCATCACGCA GCGGCTGCTG CGCGAAAGTG ACAAGCTCAA GCTATTCGAG
TGGCACCCGA CCGACCTGCG GGCCTTGGCC GGCCATGTGG CCCAGTTGCA AGCGGGCCGC
CAAGTGGCCG TATTCCACGA GGACGGTTTT CAGGGCATCC GGAAATTTCT ACCACCGCCC
CAGCGCCGCG CTTTGCTGCT GTGCGATCCA AGCTATGAAA TCAAAAGCGA CTATGGCAAG
GTGCTGGACT TGGCCACGGA CTCGCTCAAG CGCTTTGCCA CCGGCTGCTA CATGTTCTGG
TACCCCATCA TCGGGCGCCC CGAAGCGCAT GAACTGCCCC GGCGCCTGAA AACGTTGGCC
AGCAAAGCCG GCAAGAGCTG GCTGCATGCC ACGCTGACCG TCAAATCGGG CCAACGCACG
GCAGCCGGTA GCCTCAAGCG CCCCGGCCTG CCAGCCAGCG GCATGTTTCT GATCAACCCG
CCGTTCACGC TGAAGGCGGC GCTGACCCCC GCGCTGCCGC AGATGGTGCA GTTGCTGGCG
CAGGACAGAC ACGCCACGCA CACGCTCGAA TCAGCGGGGT GA
 
Protein sequence
MFSYRHAFHA GNHADVFKHT VLIATLQYLT DKDAALTVLD SHAGAGLYRL DGDYARTSGE 
AADGVVRLFA APGSALAPAL QAYVDMVGAF NQGRRLRVYP GSPCITQRLL RESDKLKLFE
WHPTDLRALA GHVAQLQAGR QVAVFHEDGF QGIRKFLPPP QRRALLLCDP SYEIKSDYGK
VLDLATDSLK RFATGCYMFW YPIIGRPEAH ELPRRLKTLA SKAGKSWLHA TLTVKSGQRT
AAGSLKRPGL PASGMFLINP PFTLKAALTP ALPQMVQLLA QDRHATHTLE SAG