Gene Veis_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1711 
Symbol 
ID4692185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1908742 
End bp1910157 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content70% 
IMG OID639849472 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_996484 
Protein GI121608677 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACG GCGCCGGCAT CGTGGCGGTG CGCATCTGGC CCGCGCCCGA GTACTCGCGC 
GTGACCATCG AATCCGATGA AGCGCTGAGC GCCAAGCCGT TTTTCGTGGC CACGCCGCCA
CGCCTGGCGG TGGACATCGA AGGCGCAGAC CTCAGCCCCG CGCTGCGCGA ACTGGTGGCC
AAAGTCCGCT TCGACGACCC GAATATTGCC GGCATCCGGG TCGGGCAAAA CGCGCCCGGC
GTGGTGCGGC TGGTGATAGA CCTCAAGCAG GCCGCGCTGC CGCAGGTGTT CACGCTGCCC
CCGGTGGCGG CGTACCGGCA CCGGCTGGTG CTGGACCTGT ACCCGGCCGC GCCGATGGAC
CCGCTGCAAG CACTGATTGC CGAGCGCCTG CGCGACGCGC CGCCGCCCCC GGCAACAGCC
GCCCCGGCCC CGGCCCCGGC GACGACCGCC CAGACTCCGG CGCCACCGGC CGCGCCTGAC
CCGCTGGACG CACTGATCGC CCAACACAGC AATCACCGCA GCCCGCCCCC GGCAGAAACC
GCGCCGCCCA CGCTGGCCGC AGCGCCCATC AGCACCGCCC CTGCTGCACC GGCACCGCCG
CTCCCCGCTG TCCCTGCCGC ACCGGCGCCC CCCATCGTCC CCGCCGTACC GGCACGCCCC
GGCAACCGCG CCACGGCCAC ACCAACCGAT CGCCTCATCA TCGTGGCGCT GGACCCCGGC
CACGGCGGCG AAGACCCTGG CGCCATCGGC CCTGCGGGCA CGCGCGAGAA AGACGTGGTG
CTGCGCGTGG CGCAGTTGCT GCGCCAGCGC ATCAACGCCA CCACCGTGGC CGGCAACCCG
ATGCGCGCCT ACCTGACGCG CGACGGCGAT TACTTCGTCC CCCTGGGCAC GCGCGTGCAA
AAAGCCCGGG ACGTGCAGGC CGACCTGTTC GTGAGCATCC ATGCCGACGC ATTCACCACC
CCTGCGGCGC GGGGCGCCAG CGTGTTTGCG CTCAGCCAGA GCGGCGCATC CAGCGCGGCA
GCGCGCTGGA TGGCGAACAA GGAAAACCAA TCCGATCTGG TGGGCGGCAT CAATGCGCAG
CGGCAAGCGC AAGACCGGTA TGTGCAGTTC ACCAAACTGG ACATGAGCAT CACCGCGCAG
ATCAAGGACA GCCTCCAACT CGGCCGCGTG CTGCTGGGCG AGATCGGCCA ACTGGGCCAG
TTGCACAAGC CGCAGGTGGA GCAGGCCGGC TTTGCCGTGC TCAAGGCCCC CGACATTCCC
AGCGTGCTGG TCGAGACCGC CTTCATCAGC AACCCCGAGG AGGAAAAGCG CCTGCGCAGC
AGCGCCTATC AAGAGCAACT GGCCAATGCG CTGATGCGCG GCATCACGCG CTACTTTGCC
AAAAACCCGC CGCTGGCGCG CAGCCGCTCG ATTTGA
 
Protein sequence
MAHGAGIVAV RIWPAPEYSR VTIESDEALS AKPFFVATPP RLAVDIEGAD LSPALRELVA 
KVRFDDPNIA GIRVGQNAPG VVRLVIDLKQ AALPQVFTLP PVAAYRHRLV LDLYPAAPMD
PLQALIAERL RDAPPPPATA APAPAPATTA QTPAPPAAPD PLDALIAQHS NHRSPPPAET
APPTLAAAPI STAPAAPAPP LPAVPAAPAP PIVPAVPARP GNRATATPTD RLIIVALDPG
HGGEDPGAIG PAGTREKDVV LRVAQLLRQR INATTVAGNP MRAYLTRDGD YFVPLGTRVQ
KARDVQADLF VSIHADAFTT PAARGASVFA LSQSGASSAA ARWMANKENQ SDLVGGINAQ
RQAQDRYVQF TKLDMSITAQ IKDSLQLGRV LLGEIGQLGQ LHKPQVEQAG FAVLKAPDIP
SVLVETAFIS NPEEEKRLRS SAYQEQLANA LMRGITRYFA KNPPLARSRS I