| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1691 |
|---|
| Symbol | |
|---|
| ID | 4694343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1884538 |
|---|
| End bp | 1885674 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639849452 |
|---|
| Product | twitching motility protein |
|---|
| Protein accession | YP_996464 |
|---|
| Protein GI | 121608657 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
|---|
| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCG ACCAGGCCAG CAAATTCATC AATGACCTGT TGCGGCTGAT GGTCAGCCGC
AACGGCAGCG ACTTGTTCAT CACCGCAGAA TTTCCGCCGG CCATCAAGGT CGATGGCAAG
GTGACCAAGG TCTCGCCCCA GCCGCTGTCC CCGAGCCACA CGCAGACGCT GGCCCGCGCC
ATCATGAGCG ACAAACAGGT GTCCGACTTC GAGCGCACCA AAGAATGCAA CTTCGCCATC
TCGCCCGCCG GCATCGGCCG CTTTCGGGTC AACACCTTCA TACAGCAGGG CAAGGTCGGC
ATGGTGCTGC GCACGATTCC GCTGACGCCG CCGACCATCG ACAGCCTGAA ACTGCCGCAG
GTGCTCAAGG AAGTGTCCAT GCACAAGCGC GGCCTGTGCA TCCTGGTGGG CGCCACCGGC
TCGGGCAAGA CCACTACGCT GGCAGCGCTC GTCGACTGGC GCAACGAAAA CTCGTTCGGC
CACATCGTCA CGGTGGAAGA CCCGGTCGAA TTCGTGCACT CGCACAAGAA CTGCGTGGTG
ACGCAGCGCG AAGTGGGTCT GGACACCGAC AGTTGGGAAC TTGCGCTCAA AAACGCGCTG
CGCCAAGCCC CCGACGTGGT CCTGATGGGC GAGATCCGCG ACCGCGAAAC CATGGCGCAC
GCGATCACCT TCTCCGAAAC CGGCCATCTG TGCCTGGCCA CGCTGCACGC CAACAGCGCC
AACCAGGCAC TCGACCGGAT CATCCACTTC TTCCCCGAAG ATTCCCGCAT CCAGATGCTG
ATGGACCTGT CACTGAACCT GCGCGCCCTG ATATCGCAGC GCCTGATCCC GAAACAGGAC
GGCAGGGGCC GCATCGCTGC GGTCGAGGTG CTGCTCAACA CGCCGCTGAT CTCCGACCTG
ATCTTCAAGG GCGAAGTCTC GGAGATCAAA GAAATCATGA AAAAGAGCCG CAACCTGGGC
ATGCAGACCT TCGACCAGGC ACTGTTCGAC GCCTACGATG CCTACGCGAT CAGCTACGAA
GACGCGCTGC GCAACGCCGA TTCGGTCAAT GACCTGCGCC TGCAAATCAA ACTCAACAGC
CAACGCGCCA AGTCGCCCGA CCTGGCCGCT GGCACCGAGC ATTTAGGGAT CGTTTGA
|
|---|
| Protein sequence | MDRDQASKFI NDLLRLMVSR NGSDLFITAE FPPAIKVDGK VTKVSPQPLS PSHTQTLARA
IMSDKQVSDF ERTKECNFAI SPAGIGRFRV NTFIQQGKVG MVLRTIPLTP PTIDSLKLPQ
VLKEVSMHKR GLCILVGATG SGKTTTLAAL VDWRNENSFG HIVTVEDPVE FVHSHKNCVV
TQREVGLDTD SWELALKNAL RQAPDVVLMG EIRDRETMAH AITFSETGHL CLATLHANSA
NQALDRIIHF FPEDSRIQML MDLSLNLRAL ISQRLIPKQD GRGRIAAVEV LLNTPLISDL
IFKGEVSEIK EIMKKSRNLG MQTFDQALFD AYDAYAISYE DALRNADSVN DLRLQIKLNS
QRAKSPDLAA GTEHLGIV
|
|---|
| |