| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1688 |
|---|
| Symbol | |
|---|
| ID | 4693429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1882425 |
|---|
| End bp | 1883468 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639849449 |
|---|
| Product | twitching motility protein |
|---|
| Protein accession | YP_996461 |
|---|
| Protein GI | 121608654 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
|---|
| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.802614 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACATTA CCCAATTGCT CGCATTCGGC GTCAAGAACA AGGCGTCGGA TTTGCACCTT
TCTGCTGGTC TGCCGCCGAT GATCCGGGTC CATGGCGACG TGCGGCGCAT CAACATCGAT
GCGCTCGACC ACAAGGCGGT GCATTCCATG GTGTACGACA TCATGAGCGA CTCCCAACGC
AAAATCTATG AGGAATTTCT GGAGATCGAC TTCTCGTTTG AAATCGAAGG CTTGGCGCGC
TTTCGCGTCA ACGCCTTCAC CCAGAACCGC GGCGTGGCCG CCGTGTTCCG CACGATTCCG
AGCAAAATCC TGACGCTCGA GCAACTCAAC GCCCCGAGGA TCTTCGCCGA CCTGGCGCTC
AAGCCGCGCG GGCTGGTGCT GGTGACCGGC CCCACCGGCT CGGGCAAGTC GACCACGCTG
GCGGCCATGG TCAATTTCCT GAACGAAACC GAGTACGGCC ATATCCTGAC GGTGGAAGAC
CCGATCGAAT TCGTGCACGA GTCCAAGAAA TGCCTGATCA ACCAGCGCGA AGTAGGCCCG
ATGACGCTGT CGTTCTCCGC CGCGCTCAAA TCGGCCTTGC GCGAAGACCC CGACGCCATC
CTGGTCGGCG AAATGCGTGA TCTGGAAACC ATCCGCCTGG CGATGACGGC CGCTGAAACC
GGCCACTTGG TATTCGGCAC GCTGCACACC TCCAGCGCCG CCAAGACCAT AGACCGGATC
ATCGACGTGT TCCCGTCCGA AGAAAAAGAA ATGATCCGCG CCATGCTGTC CGAATCGCTG
CAGGCCGTGA TCTCGCAAAC CCTGTGCAAG ACGCGCGACG GCGCGGGCCG CGTGGCGGCG
CATGAAATCA TGCTCGGCAC CAGCGCCATC CGCAACCTGA TCCGCGAGGC CAAGGTGCCG
CAGATGTACT CGGCGATACA GACCGGCAAC AGCGTGGGCA TGCAAACCCT GGATCAGAAC
CTGACCGACC TGGTAAAGAG CAAAATCATC ACCCCAGCCG AAGCGCGCAG CAAAGCCAAG
ATTCCCGAAA ACTTCCCCGG CTGA
|
|---|
| Protein sequence | MDITQLLAFG VKNKASDLHL SAGLPPMIRV HGDVRRINID ALDHKAVHSM VYDIMSDSQR
KIYEEFLEID FSFEIEGLAR FRVNAFTQNR GVAAVFRTIP SKILTLEQLN APRIFADLAL
KPRGLVLVTG PTGSGKSTTL AAMVNFLNET EYGHILTVED PIEFVHESKK CLINQREVGP
MTLSFSAALK SALREDPDAI LVGEMRDLET IRLAMTAAET GHLVFGTLHT SSAAKTIDRI
IDVFPSEEKE MIRAMLSESL QAVISQTLCK TRDGAGRVAA HEIMLGTSAI RNLIREAKVP
QMYSAIQTGN SVGMQTLDQN LTDLVKSKII TPAEARSKAK IPENFPG
|
|---|
| |