| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1643 |
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| Symbol | |
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| ID | 4690575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1825639 |
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| End bp | 1827000 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639849406 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_996418 |
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| Protein GI | 121608611 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.697886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA CCGACCCTTT CGCACAAGCA TTCCCGGTAT CTTCCGTGCC CGGGATTCGC
AACGTCCCCG AGCCGCCACC GTCCGACACC GGGCGCGCGG CGCGCATCGG GCTGTGTGTG
CTGGGCCTGG GGCTGGGCGG CTTCCTGCTG TGGGCCACGC TGGCCCCGCT CGACGAAGGC
GTGCCCAGCC AGGGCGTGGT GACGCTCGAT ACCAAGCGCA AGCTGGTGCA GCACCTGACC
GGGGGCATCG TCAAACAGGT CTTCGTGCGC GAGGGGGATA TGGTTCAGGC CGGCCAGCCC
TTGATCGAGC TCGACGATGC GGTGGCCAAG GCCAACTATG AGGCGGTGCG CCAGCGCTAT
CTCGGCCTGC GCACCGTGCA GAGCCGACTG CTGGCCGAGC AGACCGGGGC CGCCAAGATC
AGTTTCCACC CGGACCTGCA GGCCGCCGCC GACGACCCGC TGATACGCCA GCAGATGCAG
TACCAGGAGC AGCTGATCTT GTCGCGGCGC GCGGCCTTGC GCGCCGACCT GCAAGCCATC
GAAGAAAGCA TACAGGGCCA AAAAGCCTTG CTGCAATCGT ATGCCGGCAT GTTGACCAGC
CGGCGCGGAC AACTGGGCCT GCTCGAAGAT GAACTGCGCC ACACGCGCGA ACTGGTCAAG
GAAGGCTACA CGCCGCGCAA CCGGCAACTG GAGCTCGAGC GCATGGTCGC CGAGTCCAAC
CTGTCGATCA CCGACCTGCT GGGCAATACC ATGCGCACCC AGCGCTCCAT TGGCGAGATG
CGCCAAAAAG CCTTGGCGCG CGAGCAGGAA TACCGCAAGG AAGTCGAATC CATGCTCGGC
GACGTCACCC GCGACGTTCA GTCGGACACC GACAAATACC TGGCACTCAA GGCCGACCTG
GAGCGCATCG AGATCCGCTC GCCGGTCTCC GGCCAGGTGG TGGGCCTGGC GGTTCAGACC
GTCGGGGCCG TGATCCAGCC CGGGCAGCAA TTGATGGGCA TCGTGCCGCC GGACGCACCG
CTGCTGCTGG AAGCGCACAT TGCCCCGCAC CTGATCGACA AGCTGCGCCC CGGCCTGCAT
GCGGACGTGC GTTTCTCGGC CTTCGCGCAT TCCCCGCATC TGGTGGTGCA AGGCGAGCTC
GCGTCGGTAT CGGGCGACCT GCTGACGGAT GCGCAATCCG GCGTGTCGTA CTACCTGGCG
CGCATCAAGG TCACGTCCGA AGGCATGAAA ACCCTGGGCC AGCGCCACCT GCAGCCCGGC
ATGCCCGCCG AAGTAGTCAT CAAAACCGGC GAGCGCACCA TGCTGACCTA CCTGCTCGGG
CCCTTGCTCA CCAGACTGTC GCACTCGTTG AAGGAGGAAT AA
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| Protein sequence | MASTDPFAQA FPVSSVPGIR NVPEPPPSDT GRAARIGLCV LGLGLGGFLL WATLAPLDEG
VPSQGVVTLD TKRKLVQHLT GGIVKQVFVR EGDMVQAGQP LIELDDAVAK ANYEAVRQRY
LGLRTVQSRL LAEQTGAAKI SFHPDLQAAA DDPLIRQQMQ YQEQLILSRR AALRADLQAI
EESIQGQKAL LQSYAGMLTS RRGQLGLLED ELRHTRELVK EGYTPRNRQL ELERMVAESN
LSITDLLGNT MRTQRSIGEM RQKALAREQE YRKEVESMLG DVTRDVQSDT DKYLALKADL
ERIEIRSPVS GQVVGLAVQT VGAVIQPGQQ LMGIVPPDAP LLLEAHIAPH LIDKLRPGLH
ADVRFSAFAH SPHLVVQGEL ASVSGDLLTD AQSGVSYYLA RIKVTSEGMK TLGQRHLQPG
MPAEVVIKTG ERTMLTYLLG PLLTRLSHSL KEE
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