| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1642 |
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| Symbol | |
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| ID | 4693324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1824295 |
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| End bp | 1825635 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639849405 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_996417 |
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| Protein GI | 121608610 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.779397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCC TCGGCAGCAC AGCGCAGAAC AAATCGTCTT GGCGGGCTGG CATGGCGGCC
CTTGGTCTCT TGCTGGCCGG ACCGGCCTCG GCCATAGACC TGCTGCAAGC CTACCAGGGC
GCATTGGAAC AAGACGCCAC CATCCGCGCC GTCCGGGCGG GGGTGCAGGC CAGCGGTGAG
CGGCTCGTGC AGGCCCGGGC CGCGCGCTAC CCCTATATCG CGTTCAGCGC CGGCTACAAC
CGCAACGAAC TGAGCAAAGC GGCGGTGGAT GACCAGCATT ACCCGAGCAG CAACACCACA
CTGAGCTTGC GCCAGCCCAT TTACCGCAAA GGCCTGGCGG TCGACCTGGA GCAGGCGCAG
CAGATACGGG CCGAGGCCGA CGCACAGCTC GACCGTGAAC TGCAAAACCT GAGCGTGCGC
GTGACCGACG CCTATTTGCA ACTGCTGTAC GCCCATGAGT ACCTGACCCT GATGCAGGCG
CAGAAAACCG CCACCACCAC CGGGCTCGAT GCCGCGCGCA AGCTGCTGGC GGCCGGCAAC
GGCACGCGCA CCGATGTCGA CGAAGCCCAG GCCAGACTGG ACATGGTGAC CGCCCAGGAG
CTCGAAACCC GGCAACAAGA GGAGTACGCG CGCCGTCAGT TGCAGACGCT GATCAACCAG
CCGGTCGACA CCCTCAGCCC GCTCGATGAA GCCAAGTTCC TGGCCTGGTC GCCGGCGCAG
CGCAGCGTGC AGGAATGGCT GCAGCAGGCC GAAGACAACA GCCCGGAAAT CCGGCAGATG
AAAGCACGCC TGGAGGCCGC CCGGCTGGAG ATCGACAAGG CACGCAGCGG GCATCTGCCC
ACACTGGACG CGCTGGCCCA ATGGACCAAC AGCGGCAGCG AAAACGTCTA CAACCCCGGC
ACCCGTTACA TACAACGCTC GATCGGTCTG CAATTGAACG TGCCGCTGTA CTCCGGCGGC
TCGGTCAGCT CGACGGTGCG CCAGGCCGTG GCCGAACAAA TGCGCACCAG CGAATTGCTG
GAGGCCACGC GCCGCGATCT CAGCCTGCGC ATCCACACCG AGTTCCGTGG CGTCAGCGAA
GGGCCGTTGC GCATCCATGC GCTGGATCAG GCCGCACGCT CGGCAGCCCA ACTGGTGCTA
TCGGCCCGCC GCTCGCTGGC CGGCGGCTCC AGAACCCTGA TGGACGTGCT CAATGCCGAG
CAGCAAAAGG AAATGGCATT GCGCGACCTG GCCCGGGCGC GCTACCTCTT CCTGATATCC
TACGTGCGCC TGCAGGCCCT GTCCGGCGGC GACAGTGCTG CCAGCATTGC GGACGTGAAT
GCGCTGCTGC AGACACCCTG A
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| Protein sequence | MAILGSTAQN KSSWRAGMAA LGLLLAGPAS AIDLLQAYQG ALEQDATIRA VRAGVQASGE
RLVQARAARY PYIAFSAGYN RNELSKAAVD DQHYPSSNTT LSLRQPIYRK GLAVDLEQAQ
QIRAEADAQL DRELQNLSVR VTDAYLQLLY AHEYLTLMQA QKTATTTGLD AARKLLAAGN
GTRTDVDEAQ ARLDMVTAQE LETRQQEEYA RRQLQTLINQ PVDTLSPLDE AKFLAWSPAQ
RSVQEWLQQA EDNSPEIRQM KARLEAARLE IDKARSGHLP TLDALAQWTN SGSENVYNPG
TRYIQRSIGL QLNVPLYSGG SVSSTVRQAV AEQMRTSELL EATRRDLSLR IHTEFRGVSE
GPLRIHALDQ AARSAAQLVL SARRSLAGGS RTLMDVLNAE QQKEMALRDL ARARYLFLIS
YVRLQALSGG DSAASIADVN ALLQTP
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