| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1623 |
|---|
| Symbol | |
|---|
| ID | 4692040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1809172 |
|---|
| End bp | 1810539 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639849387 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_996399 |
|---|
| Protein GI | 121608592 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTCCA TGAGCACCAC GCGCTTTCTC ACCGGCATCA CCACCACCGG CACACCCCAC
CTGGGCAACT TTGTCGGCTC CATCCGTCCC TCGGTGGCGG CCAGCCGGCA GCCGGGCGTG
CAGAGCTTTT ACTTTCTGGC CGACTACCAC GCGCTGATCA AGTGCGAAGA CCCGCAGCGC
GTGCAGCGCT CGACGCTGGA GATCGCGGCC AGTTGGCTGG CTGCCGGGCT CGACCCCGAG
CAGGTCACGT TCTACCGCCA GTCCGACATC CCCGAAATCC CCGAACTGAC CTGGCTGCTG
ACCTGCGTGA CCGGCAAGGG CCTGCTCAAC CGGGCGCATG CCTACAAGGC CGCCAACGAC
AAGAACAGCG CCGCAGGCCG CGAGGCCGAC GCTGGCGTGA CGGCCGGCCT GTTCATGTAC
CCGCTGCTGA TGGGGGCCGA CATCTTGCTG TTCAACGCGC ACCAGGTGCC CGTGGGCCGC
GACCAGAGCC AGCATATAGA GATGGCGCGC GCCATGGCGA GCAGTTTCAA CCACCTGTAC
GGCGCGCATT TCGTGCTGCC CGAGGCGGCC ATCGACGAGC ATGTGGCCAT CCTGCCCGGG
CTCGACGGCC GCAAGATGAG CAAGAGCTAT GACAACACGA TACCGCTGTT CAGCACGCGC
GAGCAGCTCG GCCGGCTGAT CGCCGGCATC CTGACCGACT CGCGCGCGCC CGGCGCGCCC
AAGCAGGTCG AGGGCTCAGC GCTGTTTCAG ATCTACCAGG CCTTTGCCAC GCCCACGGAA
ACCGCAGCGC TGCGCCAGCA CTATGCCGAC GGCATCGCCT GGGGCGAGGT CAAGCAGTTG
CTGCTCGACT GCGTCGACCA AACCATTGCC CCGATGCGCG CGCAGTACCA GGCGCTGCTC
GATGACCCGG CCCGCATCGA ACAGACCCTG CTGGCCGGCG CCGAGCGCGC CCGCGCACTG
GCCAGGCCGT TCATGCGCGA GCTGCGCGGC GCCGTCGGTC TGCGCAGTCT GGTGCCGGCT
GCGCAGGCCA CGGCGGGGGC CGAGGTGGTC GAGGCGGTGA AAGCGGTGAA ATCGACCAAA
GCGGCAAAAA CGGCCAAAAC GGGACAGCCC GCATTCAAGC AGTACCGCGA GGCCGATGGC
AAGTTCTACT TCAAGCTCGT CGCCGCCGAT GGTCGTCTGC TATTGCAAAG CCAGGGCTTC
GCTGCGCCCA GGCAGGCCGG TCAGGCCATT GCCGAACTGC ACACCGGTGC CGGCGCGCTG
CCAGCGCTGG CGTCCCGGTT GGTGCCGGTG GATGGCGTGG ACGCGGCCGA GGTCATGGCG
GCGTTGCAGG CGTTGGCCCC GGGTCAGCCG CAGCCGGCAC GCAAATAA
|
|---|
| Protein sequence | MHSMSTTRFL TGITTTGTPH LGNFVGSIRP SVAASRQPGV QSFYFLADYH ALIKCEDPQR
VQRSTLEIAA SWLAAGLDPE QVTFYRQSDI PEIPELTWLL TCVTGKGLLN RAHAYKAAND
KNSAAGREAD AGVTAGLFMY PLLMGADILL FNAHQVPVGR DQSQHIEMAR AMASSFNHLY
GAHFVLPEAA IDEHVAILPG LDGRKMSKSY DNTIPLFSTR EQLGRLIAGI LTDSRAPGAP
KQVEGSALFQ IYQAFATPTE TAALRQHYAD GIAWGEVKQL LLDCVDQTIA PMRAQYQALL
DDPARIEQTL LAGAERARAL ARPFMRELRG AVGLRSLVPA AQATAGAEVV EAVKAVKSTK
AAKTAKTGQP AFKQYREADG KFYFKLVAAD GRLLLQSQGF AAPRQAGQAI AELHTGAGAL
PALASRLVPV DGVDAAEVMA ALQALAPGQP QPARK
|
|---|
| |