| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1620 |
|---|
| Symbol | |
|---|
| ID | 4693390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1805121 |
|---|
| End bp | 1806971 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639849384 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_996396 |
|---|
| Protein GI | 121608589 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG CCGCCGATTC TGTTTCGCCA GCACACTACA GTTTTCGCCC TGCCAGCGCC
GAAGCCCTGT GGCAGCAGAT ATCCACACCG CGCCCCACGG CGGGCAAGGC GCGGCGCCTG
GGCGAGGCAC TGGTGCATGC CGGACTGTTG ACCGCGCCCG GGCTCTGGCA TGGCCTGCAA
GTGCAGCAAC AAGAGCGCGA AAAGGGCCAG CACCGGCCCA TCGGCCAGAT CCTGGTGGAA
CTGGGTGCGC TGACGCAGGA GCAACTGCGC GCGGTCATTG CCAGTTGGCT GGGCGAGTAC
CAAGTGCACC CTGGCGACCT CAAGCCCGAA GCGGCGGCCC TGGCCCTGGT GCCCCGCGCC
ATGGCCGAGC GCGAATCGGT GCTGCCGCTG CTGATACGCG AAGACACGCT GGTGCTGCTG
ATGATCGATC CCGGCAAGCG CTCGCTGCTC GACGAATTGC GCTTTTTGAC CCAGCGCCGG
CTGATTGCGC TGCAGGCCGC GCCGGACACG CTCGGGCCCG CCATCCGCAA GGCCTACCAG
CCCCCCGGCA CCGGAACCGA GGAGGAACCG GCGCCGGTCG TGCGCAGCAC ATTGCAAGAA
CTGCTCAGCA CCCTGGACAG CACCGAACCC GGCGATGCGA ACGAGGCCGA TGCGCTCAAC
GAGTCGGACA CCCTGGCACA GATCATCAAC GCGGTGATCG ACGAGGCCAT CGGCCGCAAC
GCATCCGACA TCCACATCGA GACCGAACTG GCCCCGAAGA GCCTGCGCAT CCGCCTGCGC
ATCGACGGCG ACCTCGCGAC CCACCTGGAA CTACCGGCGC GCTACCGCGT CGCCGTGGTG
GCGCGCATCA AGGTCATGGC GGGCATGGAT ATCTCCGAGC GCCGCAAGCC CCAGGAGGGC
AAGATCGACT TTGCCCGCTT TGGTGGCCCG CCGGTCGAGT TGCGCGTGAC CTCCATCCCC
ACCTCGCAGG GGCTGGAAGA TGTGGTGCTG CGGCTGCTCA CCGGTGTTTT GGCGCTCGAT
CGCATCGACC TGAGCCGCGC CAACCTGCTG GCACTGCAAT CGGTGGCGCA AAAGCGCTAC
GGCCTGGTGC TGGTGTGCGG GCCCACAGGC TGCGGCAAGA CGACCACATT GCATTCAGTG
TTGCGCGACA TCAACGGCAC AGGCCGCAAG ATCTGGACTG CCGAGGACCC GATCGAGATC
ACCCAGGATG GTCTGCGCCA GGTGCAGGTG AACCCGCGCC TGGGCTGGAC CGTTGCGGCC
GCGATGCGCG CCTTCCTGCG GGCCGACCCG GACGTGATCA TGGTCGATGA AATGCGCGAC
GAGGAGATAG CGCGCATCGC CCTGGAGGCC GCGTTCACCG GCCATCTGGT GCTGACCACG
CTGCTGACCA CCGCCGCGCC TGATGCCGTT GCACGCCAGT TGGGGCAGTT GGACATCAAA
CTGAATCCGC TCGATTTTTC CGCCCTGCCG CTGGCGATTC TGGCCCAGCG TCTGGTGCTG
CGCCTGTGCG TGGCCTGCCG CGAGTCCCAG GTGATCGACC AGGACCGGCT GATGGACCTG
GCCTCGCAGT ACCTGGAAAG CGGCAGCGGC AGCAATACGC TGGAGGCGCG CACTGCGCAG
GTCGAGCGTT GGCGCTTGCA GCACGGCGAC GCGCAGGGTG CGTTGCGCCT GTGGCGCCAC
AAGGGCTGCG CCGAATGCCA AGGCTTCGGC TACCAGGGCC GGCTGGGCAT CCATGGGCTG
ATGGTGCGCG ATGAGCCGGC GAACTGGCTC ACCTTGCGGC AAGACGGTAT CGAGAAGGTG
TTGCAGGGCT TGACCGACAT GGCGCAAGTG CTGGCAGCGA CCGACCTGTA G
|
|---|
| Protein sequence | MTDAADSVSP AHYSFRPASA EALWQQISTP RPTAGKARRL GEALVHAGLL TAPGLWHGLQ
VQQQEREKGQ HRPIGQILVE LGALTQEQLR AVIASWLGEY QVHPGDLKPE AAALALVPRA
MAERESVLPL LIREDTLVLL MIDPGKRSLL DELRFLTQRR LIALQAAPDT LGPAIRKAYQ
PPGTGTEEEP APVVRSTLQE LLSTLDSTEP GDANEADALN ESDTLAQIIN AVIDEAIGRN
ASDIHIETEL APKSLRIRLR IDGDLATHLE LPARYRVAVV ARIKVMAGMD ISERRKPQEG
KIDFARFGGP PVELRVTSIP TSQGLEDVVL RLLTGVLALD RIDLSRANLL ALQSVAQKRY
GLVLVCGPTG CGKTTTLHSV LRDINGTGRK IWTAEDPIEI TQDGLRQVQV NPRLGWTVAA
AMRAFLRADP DVIMVDEMRD EEIARIALEA AFTGHLVLTT LLTTAAPDAV ARQLGQLDIK
LNPLDFSALP LAILAQRLVL RLCVACRESQ VIDQDRLMDL ASQYLESGSG SNTLEARTAQ
VERWRLQHGD AQGALRLWRH KGCAECQGFG YQGRLGIHGL MVRDEPANWL TLRQDGIEKV
LQGLTDMAQV LAATDL
|
|---|
| |