Gene Veis_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1590 
Symbol 
ID4695168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1775784 
End bp1776218 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content50% 
IMG OID639849355 
Productthioesterase superfamily protein 
Protein accessionYP_996367 
Protein GI121608560 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.228465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00903187 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGACA TGCATTTCAC TAAACAGTAT CCAATCCGTT TCTCCTTCTG TGACCCGGCC 
GGCATTGTGT ACTTCCCCCA ATACCTCGTG CTGAGTAATT GGCTGATAGA AGACTGGTTC
AATGAAGGAT TGGGAATAGA CTTCGCATCT TTCATCGGTC ACCGTCGCCT GGGTCTTCCC
ATTGTCAAAT TGAATTGTGA ATTTATCAGT CCATCACACC ACGGCGACAC ACTCACATTG
CAGTTACGTG TTGCCAAGTT GGGGCAGCGC TCCATCACTC TGGATCTTGA AGGGCATGTC
GATATGATTA TGCGTCTGCG CTGCCAACAA GTGCTGGTAT TCACCTCTCT GGACACAGAA
AAATCGACTC CCATGCCGGA CGATGTGGGC GATGCATTGC GGGCATTGCT ATCGCAGCAG
GAGGACATAG CATGA
 
Protein sequence
MHDMHFTKQY PIRFSFCDPA GIVYFPQYLV LSNWLIEDWF NEGLGIDFAS FIGHRRLGLP 
IVKLNCEFIS PSHHGDTLTL QLRVAKLGQR SITLDLEGHV DMIMRLRCQQ VLVFTSLDTE
KSTPMPDDVG DALRALLSQQ EDIA