| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1588 |
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| Symbol | |
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| ID | 4692810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 1773910 |
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| End bp | 1775367 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639849353 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_996365 |
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| Protein GI | 121608558 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.104897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00377444 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAT CTTCATTGCA TACACTTACT GCTTTGGACT GCGACAAAAG CATGCCGCTC
TATCGCCAGG TGTATCAGCG GTTCATCTGT GCGATTAAGC AGGACATTTT TTCATCCGGG
CAGCGTGTTC CCTCGATACG GGCACTTGCC AGTGAACTAC GGATATCACG CAATACGGTC
GAGGTGGCAT ATAACTTGTT GATTGGCGAG GGGCATCTGG AGGCGCAAGG ACAGGCAGGG
ACTATCGTAT CTCCTGTGTC TCCGTACTTG CGAGCTGCAA TGAATCATAG AACTCCGGGA
CGAGAAATAA ATGATCATAA AACCCTTGCG AGGACAGGAA ACGATTCACT GTACGATACG
GCATCAGAAC TTCAGCCGCT ACCGTATCAA CTTGGCTTGC CTGCGCTGGA CATGTTTCCG
CACAAATTGT GGTCGAGTTT GATCGCGCAG CAAATACGCA AGCAAAGTCG ATGCCACGCT
TATCCTCATT CGGCGGGGCA TTCACAACTA CGCGAAGCAA TTGCTGCTTA TTTGCACATC
TCGCGTGGAT TGGACTGTAC GCCGGAGCAG GTCTTCATTA CCTCAGGCTA TCGGGGCTCC
ATCGGGTTGA TAGGACGCAC ATTACTTCGT CCGCTTGATC AGGTCTGGCT GGAAGATCCG
TGCTTTCCGC CCGGCTTTCA CTTGATGTCC GAAATGGGCG CACAGCTGAT GCCGGTGCCT
GTAGATGAAC ATGGGCTTTG TGTCGCGGAA GGCAGAGCGC GGGCACCACA TGCCCGATTT
GCGCTGGTGA CACCGGCGCA CCAAAGTCCA CTTGGTGTTT CGTTATCATT GGTGCGACGA
CTGGAGTTGT TGGCTTGGGC GGAGCAGAAC AATTCTTTTA TCATTGAAGA CGATTATGAT
AGTGAATACC GCTATGATGG GTGGCCATTA CCAGTACTGG CCAGTTTGGG AGTTAACGAC
AACGTTCTTT ACCTCGGTAC ATTTAGCAAG GTGCTCAGTC CGGCTTTGCG CATTGCTTAT
TTGGTTGTAC CGAAACCTTT GATACAGCAG TTCAATAAAT CTTGTCCCAT CGTGAATGAT
GGCTGTCCGT TGCTGATTCA GGGTGTGATC GCCGATTTTA TCAACGAAGG TTATTTCGCC
AGGCATCTGA AGAAAATGCG CACACTGTAT TCCGAACGAC GGGAGATGGT TATTGAGAGT
CTGCACATGG TATTTGGTGA CCGCTTGCGT TTTGACGCGC CAGCTTGTGG ACTTCATCTT
CTAGCTCGTC TGGATCACGC TGAAGATGAT TTGCAATTGG CTCAGCGTGC CAAGCGTCAG
CAATTTGGCG TGGCAGCGCT GTCGGTGCGC AACATAGAGG CTGAGTGTGG CAAGGGGTTA
CTATTGGGTT TTGCCAATGT GAGCTCTCGT GAACAGGCAC TGCTGCAAGC CCATGGATTA
CATCAGTGCC TAGGGTGA
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| Protein sequence | MKKSSLHTLT ALDCDKSMPL YRQVYQRFIC AIKQDIFSSG QRVPSIRALA SELRISRNTV
EVAYNLLIGE GHLEAQGQAG TIVSPVSPYL RAAMNHRTPG REINDHKTLA RTGNDSLYDT
ASELQPLPYQ LGLPALDMFP HKLWSSLIAQ QIRKQSRCHA YPHSAGHSQL REAIAAYLHI
SRGLDCTPEQ VFITSGYRGS IGLIGRTLLR PLDQVWLEDP CFPPGFHLMS EMGAQLMPVP
VDEHGLCVAE GRARAPHARF ALVTPAHQSP LGVSLSLVRR LELLAWAEQN NSFIIEDDYD
SEYRYDGWPL PVLASLGVND NVLYLGTFSK VLSPALRIAY LVVPKPLIQQ FNKSCPIVND
GCPLLIQGVI ADFINEGYFA RHLKKMRTLY SERREMVIES LHMVFGDRLR FDAPACGLHL
LARLDHAEDD LQLAQRAKRQ QFGVAALSVR NIEAECGKGL LLGFANVSSR EQALLQAHGL
HQCLG
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