Gene Veis_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1553 
SymbolhemA 
ID4690921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1740109 
End bp1741398 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content69% 
IMG OID639849317 
Productglutamyl-tRNA reductase 
Protein accessionYP_996330 
Protein GI121608523 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00506204 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGTCT GGGCCCTAGG CATCAACCAC AGCACCGCGC CGCTCGATCT GCGCGGCCGC 
TTCGCGTTCG CGCTCGACCA AATCGCGCCC CGGCTCCAGG GTTTGCGCCA GTCGCTGAGC
AGCCACCCCG GCGTGGAGAC GGCCATGCTG TCCACCTGCA ACCGCACCGA GATCTATTGC
GCCGCCGAGC AAGCCGCCAT CGACCACACA CTGGGCTGGC TGGCGCACAG CGGCGGTGTC
AGCACTGCGC TGCTGCGCGC GCATTCCTAC ACGCTGCAAG ACAGCCGGGC CGCGCGCCAT
GCCTTTCGGG TCGCCAGCGG CCTGGACTCG ATGGTGCTGG GCGAGGCCCA GATTCTGGGC
CAGATGAAAG ATGCCGTGCG CGCCGCCGAA ACCGCAGGCG TGCTCGGCAG CACGCTCAAC
CAACTGTTTC AGCGCAGCTT TGCGGTGGCC AAGGAAGTGC GCAGCAGCAC CGAGATCGGC
GCCCACAGCA TCAGCATGGC CGCCGCTGCC GTGCGCCTGG CGGGCCAGTT GTTCGAAGAC
CTGAGCCAAA TCCGCGTGCT GTTCGTCGGC GCCGGCGCGA TGATCGCGCT GTGCGCCACG
CATTTCGCGG CCAAAAACCC CCTGGGCCTG GCGCTGGCCA ACCGCACGCT CGAGCGCGGC
GAACAGTTGG CCGCGCGCTT TGGCGCCACC GTGCTGCGCC TGGCCGATCT GCCCGAGCGG
CTGCACGAGT TCGACGCCGT CATCAGCTGC ACCGCCAGCA GCCTGCCCAT CATCGGCCTC
GGCGCCGTCG AGCGAGCGCT CAAAAAACGC CGCCACCGGC CGATGTTCAT GGTCGACCTG
GCGGTGCCGC GCGACATCGA ACCCGAGGTC AAAGCCCTGG GCGATGTCTA CCTGTACACC
GTCGACGACC TGGCCAGCGT GGTGCAGACC GGGCAGGCGA GCCGCCAGGC AGCGGTGGCG
CAGGCCGAGG CGATCATCGA TGCCGGCGTG CAGAGCTTCA TGCACTGGCT GGCCCAGCGC
AACCCCGTGG GCGGCGTGGT GCCGCTGATC CGGCAACTCA ACGCCCAGAC CGAGGTCTGG
CGCGCCAGCG AAATCGCGCG CGCGAAGAAA CTGCTGGCCA AGGGCGAAGC CCCGGACGCC
GTGCTCGACG CCCTCGCGCG CGGCCTGACG CAAAAGATGC TGCATGGCAC GATGGCCGAA
CTGCGCGCCG GCGACGCCGA CATGCGCGCG CAAACGGCGC AGACCGTGGC GCGCCTGTTC
CTGCGCGCGC AAAGCAACCA CGACCTGTAG
 
Protein sequence
MAVWALGINH STAPLDLRGR FAFALDQIAP RLQGLRQSLS SHPGVETAML STCNRTEIYC 
AAEQAAIDHT LGWLAHSGGV STALLRAHSY TLQDSRAARH AFRVASGLDS MVLGEAQILG
QMKDAVRAAE TAGVLGSTLN QLFQRSFAVA KEVRSSTEIG AHSISMAAAA VRLAGQLFED
LSQIRVLFVG AGAMIALCAT HFAAKNPLGL ALANRTLERG EQLAARFGAT VLRLADLPER
LHEFDAVISC TASSLPIIGL GAVERALKKR RHRPMFMVDL AVPRDIEPEV KALGDVYLYT
VDDLASVVQT GQASRQAAVA QAEAIIDAGV QSFMHWLAQR NPVGGVVPLI RQLNAQTEVW
RASEIARAKK LLAKGEAPDA VLDALARGLT QKMLHGTMAE LRAGDADMRA QTAQTVARLF
LRAQSNHDL